RegulonDB RegulonDB 11.2: Gene Form
   

gspA gene in Escherichia coli K-12 genome


Gene local context to scale (view description)

gspA gspC gspB gspD Fur SlyA DksA-ppGpp DksA-ppGpp gspAp4 gspAp4 gspCp3 gspCp3 gspCp2 gspCp2 gspAp1 gspAp1 gspAp2 gspAp2 gspAp3 gspAp3 gspCp1 gspCp1

Gene      
Name: gspA    Texpresso search in the literature
Synonym(s): ECK3310, G7701, b3323, yheD
Genome position(nucleotides): 3453929 <-- 3455398
Strand: reverse
Sequence: Get nucleotide sequence FastaFormat
GC content %:  
 48.98
External database links:  
ASAP:
 ABE-0010867
ECHOBASE:
 EB2725
ECOLIHUB:
 gspA
OU-MICROARRAY:
 b3323
STRING:
 511145.b3323
COLOMBOS: gspA


Product      
Name: Type II secretion system protein GspA
Synonym(s): GspA, YheD
Sequence: Get amino acid sequence Fasta Format
Cellular location: inner membrane,cytosol
Molecular weight: 55.298
Isoelectric point: 8.565
Motif(s):
 
Type Positions Sequence Comment
20 -> 137 RLCYLLGEAGSGKTWLAQQLQKDKHRRVITLSLVVSWQGKAAWIVTDDNAAEQGCRDSAWTRDEMAGQLLHALHRTDSRCPLIIIENAHLNHRRILDDLQRAISLIPDGQFLLIGRPD
26 -> 33 GEAGSGKT UniProt: ATP.
237 -> 257 MQLAVVMSGTIIALTCGWLLL UniProt: Helical.
408 -> 461 EEEILWLETMLNRALHISTEPSAEWRPLLVEKIKQFQKSHHLKTDGVVGFSTLV

 
Classification:
Multifun Terms (GenProtEC)  
  4 - transport --> 4.9.B - Putative uncharacterized transport protein
Gene Ontology Terms (GO)  
cellular_component GO:0005829 - cytosol
GO:0016020 - membrane
GO:0005886 - plasma membrane
GO:0005887 - integral component of plasma membrane
GO:0016021 - integral component of membrane
molecular_function GO:0000166 - nucleotide binding
GO:0005524 - ATP binding
Note(s): Note(s): ...[more].
External database links:  
ALPHAFOLD:
 P45756
ECOCYC:
 G7701-MONOMER
ECOLIWIKI:
 b3323
INTERPRO:
 IPR036366
INTERPRO:
 IPR027417
INTERPRO:
 IPR003593
INTERPRO:
 IPR002477
INTERPRO:
 IPR036365
PFAM:
 PF13401
PFAM:
 PF01471
PRIDE:
 P45756
REFSEQ:
 NP_417782
SMR:
 P45756
UNIPROT:
 P45756


Operon      
Name: gspAB         
Operon arrangement:
Transcription unit        Promoter
gspAB
gspAB
gspAB
gspAB


Transcriptional Regulation      
Display Regulation             
Repressed by: H-NS


Elements in the selected gene context region unrelated to any object in RegulonDB      

  Type Name Post Left Post Right Strand Notes Evidence (Confirmed, Strong, Weak) References



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