##gnf-version 1 # Copies and Copyright-Notice # # RegulonDB is free for academic/noncommercial use # # User is not entitled to change or erase data sets of the RegulonDB # database or to eliminate copyright notices from RegulonDB. Furthermore, # User is not entitled to expand RegulonDB or to integrate RegulonDB partly # or as a whole into other databank systems, without prior written consent # from CCG-UNAM. # # Please check the license at http://regulondb.ccg.unam.mx/menu/download/full_version/terms_and_conditions.jsp # # Citation # # Tierrafría, V. H. et al. (2022). RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12, # Microb Genom. 2022 May;8(5). doi: 10.1099/mgen.0.000833. PMID: 35584008. https://doi.org/10.1099/mgen.0.000833 # # # Contact # # Person: RegulonDB Team # Web Page: http://regulondb.ccg.unam.mx/menu/about_regulondb/contact_us/index.jsp # (regulondb@ccg.unam.mx) # # # Release: 11.2 Date: 05/22/2023 # ___________________________________________________________________________ # Created: 06/09/2023 15:04:53 # Columns: # (1) regulatorId. Transcription Factor (TF) identifier # (2) regulatorName. Transcription Factor (TF) Name # (3) regulatorGeneName. Gene(s) coding for the TF # (4) regulatedId. Transcription Factor ID regulated by the TF (regulated Transcription Factor) # (5) regulatedName. Transcription Factor regulated by the TF (regulated Transcription Factor) # (6) function. Regulatory Function of the TF on the regulated Transcription Factor (+ activator, - repressor, +- dual, ? unknown) # (7) confidenceLevel. RI confidence level based on its evidence (Values: Confirmed, Strong, Weak) 1)regulatorId 2)regulatorName 3)RegulatorGeneName 4)regulatedId 5)regulatedName 6)function 7)confidenceLevel ECK120011186 Fis fis ECK120011235 CRP - Confirmed ECK120011186 Fis fis ECK125286587 CRP-Sxy - Confirmed ECK120011186 Fis fis ECK120013061 CspA + Confirmed ECK120011186 Fis fis ECK120011903 DnaA - Confirmed ECK120011186 Fis fis ECK120011186 Fis - Confirmed ECK120011186 Fis fis ECK120011458 GadX - Weak ECK120011186 Fis fis ECK120011437 GlcC - Strong ECK120011186 Fis fis ECK120011294 H-NS + Strong ECK120011186 Fis fis ECK125257184 HU + Strong ECK120011186 Fis fis ECK125257184 HU - Strong ECK120011186 Fis fis ECK120011412 MarA + Confirmed ECK120011186 Fis fis ECK120013191 MarR + Confirmed ECK120011186 Fis fis ECK125140737 MazE + Confirmed ECK120011186 Fis fis ECK125257200 MazE-MazF + Confirmed ECK120011186 Fis fis ECK125257192 NtrC + Confirmed ECK120011186 Fis fis ECK120013786 XylR - Weak ECK120011190 Rob rob ECK120011412 MarA + Confirmed ECK120011190 Rob rob ECK120013191 MarR + Confirmed ECK120011190 Rob rob ECK120011190 Rob - Confirmed ECK120011194 TyrR tyrR ECK120011194 TyrR - Weak ECK120011202 ArgP argP ECK120011202 ArgP - Weak ECK120011202 ArgP argP ECK120011903 DnaA + Strong ECK120011210 CpxR cpxR ECK120015687 BaeR + Strong ECK120011210 CpxR cpxR ECK120011210 CpxR + Strong ECK120011210 CpxR cpxR ECK120013342 CsgD - Strong ECK120011210 CpxR cpxR ECK120011412 MarA + Strong ECK120011210 CpxR cpxR ECK120013191 MarR + Strong ECK120011220 ModE modE ECK120011502 NarL + Strong ECK120011229 FNR fnr ECK120011345 ArcA + Strong ECK120011229 FNR fnr ECK120011345 ArcA - Strong ECK120011229 FNR fnr ECK120011250 CadC + Weak ECK120011229 FNR fnr ECK120013805 CaiF + Strong ECK120011229 FNR fnr ECK125286588 DcuR + Weak ECK120011229 FNR fnr ECK120034476 DpiA - Weak ECK120011229 FNR fnr ECK120011229 FNR + Strong ECK120011229 FNR fnr ECK120011229 FNR - Confirmed ECK120011229 FNR fnr ECK120011394 FhlA + Strong ECK120011229 FNR fnr ECK120011465 GadW - Weak ECK120011229 FNR fnr ECK120011458 GadX - Weak ECK120011229 FNR fnr ECK120011390 HyfR - Weak ECK120011229 FNR fnr ECK120011265 Nac - Weak ECK120011229 FNR fnr ECK120011502 NarL - Strong ECK120011229 FNR fnr ECK125134855 NfeR + Weak ECK120011229 FNR fnr ECK125302598 NikR + Confirmed ECK120011229 FNR fnr ECK120012246 PdhR + Strong ECK120011229 FNR fnr ECK120012246 PdhR - Strong ECK120011229 FNR fnr ECK120013242 SoxR - Weak ECK120011229 FNR fnr ECK120011298 SoxS - Weak ECK120011229 FNR fnr ECK120013255 TdcA + Weak ECK120011229 FNR fnr ECK120013665 YeiL - Weak ECK120011235 CRP crp ECK125328145 AaeR - Weak ECK120011235 CRP crp ECK120012316 AraC + Confirmed ECK120011235 CRP crp ECK120011235 CRP + Confirmed ECK120011235 CRP crp ECK120011235 CRP - Confirmed ECK120011235 CRP crp ECK125286587 CRP-Sxy + Confirmed ECK120011235 CRP crp ECK125286587 CRP-Sxy - Confirmed ECK120011235 CRP crp ECK120013805 CaiF + Weak ECK120011235 CRP crp ECK120012036 ChbR + Strong ECK120011235 CRP crp ECK125141239 ComR - Strong ECK120011235 CRP crp ECK120013342 CsgD + Weak ECK120011235 CRP crp ECK125285349 CsqR + Strong ECK120011235 CRP crp ECK125285349 CsqR - Strong ECK120011235 CRP crp ECK120012407 CytR + Strong ECK120011235 CRP crp ECK120012407 CytR - Strong ECK120011235 CRP crp ECK125286588 DcuR + Strong ECK120011235 CRP crp ECK125285348 DgoR + Confirmed ECK120011235 CRP crp ECK120034476 DpiA - Weak ECK120011235 CRP crp ECK120012141 ExuR - Weak ECK120011235 CRP crp ECK120026337 FeaR + Weak ECK120011235 CRP crp ECK120011186 Fis + Strong ECK120011235 CRP crp ECK120011186 Fis - Strong ECK120011235 CRP crp ECK125257194 FlhDC + Strong ECK120011235 CRP crp ECK125302601 FrlR + Weak ECK120011235 CRP crp ECK120013118 FucR + Confirmed ECK120011235 CRP crp ECK125285350 Fur + Strong ECK120011235 CRP crp ECK120012092 GadE - Strong ECK120011235 CRP crp ECK125257204 GadE-RcsB - Strong ECK120011235 CRP crp ECK120011458 GadX - Weak ECK120011235 CRP crp ECK120012704 GalS + Strong ECK120011235 CRP crp ECK120011437 GlcC + Strong ECK120011235 CRP crp ECK120012730 GlpR + Strong ECK120011235 CRP crp ECK120013141 GutM + Weak ECK120011235 CRP crp ECK125257184 HU + Strong ECK120011235 CRP crp ECK125286590 HicB + Weak ECK120011235 CRP crp ECK120011390 HyfR + Weak ECK120011235 CRP crp ECK120012101 IdnR + Weak ECK120011235 CRP crp ECK120012762 LacI + Strong ECK120011235 CRP crp ECK120015681 LsrR + Confirmed ECK120011235 CRP crp ECK120013406 MalI + Confirmed ECK120011235 CRP crp ECK120013406 MalI - Confirmed ECK120011235 CRP crp ECK120012218 MalT + Strong ECK120011235 CRP crp ECK120011412 MarA + Weak ECK120011235 CRP crp ECK120013191 MarR + Weak ECK120011235 CRP crp ECK125140737 MazE + Confirmed ECK120011235 CRP crp ECK125257200 MazE-MazF + Confirmed ECK120011235 CRP crp ECK120012347 MelR + Strong ECK120011235 CRP crp ECK120011482 MhpR + Strong ECK120011235 CRP crp ECK120011240 Mlc + Weak ECK120011235 CRP crp ECK120011240 Mlc - Weak ECK120011235 CRP crp ECK120011908 NagC + Confirmed ECK120011235 CRP crp ECK120011908 NagC - Confirmed ECK120011235 CRP crp ECK125257192 NtrC + Weak ECK120011235 CRP crp ECK125257192 NtrC - Strong ECK120011235 CRP crp ECK125257196 OmpR + Confirmed ECK120011235 CRP crp ECK125257196 OmpR - Confirmed ECK120011235 CRP crp ECK120011302 OxyR + Weak ECK120011235 CRP crp ECK120012246 PdhR + Weak ECK120011235 CRP crp ECK120014044 PlaR - Strong ECK120011235 CRP crp ECK120015234 PrpR + Confirmed ECK120011235 CRP crp ECK125160661 PuuR - Weak ECK120011235 CRP crp ECK120013229 RbsR + Weak ECK120011235 CRP crp ECK120012877 RhaR + Confirmed ECK120011235 CRP crp ECK120012337 RhaS + Confirmed ECK120011235 CRP crp ECK120013144 SrlR + Weak ECK120011235 CRP crp ECK120013255 TdcA + Confirmed ECK120011235 CRP crp ECK120012145 UxuR + Weak ECK120011235 CRP crp ECK120013786 XylR + Weak ECK120011235 CRP crp ECK120014103 ZraR + Weak ECK120011240 Mlc mlc ECK120012218 MalT - Strong ECK120011240 Mlc mlc ECK120011240 Mlc - Strong ECK120011250 CadC cadC ECK120011250 CadC + Weak ECK120011265 Nac nac ECK120015630 AllR + Strong ECK120011265 Nac nac ECK120013010 AsnC - Strong ECK120011265 Nac nac ECK120013805 CaiF - Strong ECK120011265 Nac nac ECK120011953 CdaR - Strong ECK120011265 Nac nac ECK120013065 CynR - Strong ECK120011265 Nac nac ECK120015690 DhaR + Strong ECK120011265 Nac nac ECK125257188 DinJ-YafQ - Strong ECK120011265 Nac nac ECK120011903 DnaA - Strong ECK120011265 Nac nac ECK120011575 EvgA - Strong ECK120011265 Nac nac ECK120026337 FeaR + Weak ECK120011265 Nac nac ECK120026337 FeaR - Strong ECK120011265 Nac nac ECK120012092 GadE + Strong ECK120011265 Nac nac ECK125257204 GadE-RcsB + Strong ECK120011265 Nac nac ECK120011458 GadX - Strong ECK120011265 Nac nac ECK125257184 HU + Strong ECK120011265 Nac nac ECK120015243 HcaR + Strong ECK120011265 Nac nac ECK125228798 HprR - Strong ECK120011265 Nac nac ECK120015250 KdgR - Strong ECK120011265 Nac nac ECK120013164 LeuO - Strong ECK120011265 Nac nac ECK120011383 Lrp - Strong ECK120011265 Nac nac ECK120013175 LysR - Strong ECK120011265 Nac nac ECK120013406 MalI - Strong ECK120011265 Nac nac ECK120013191 MarR + Strong ECK120011265 Nac nac ECK120012802 MetR - Strong ECK120011265 Nac nac ECK120011265 Nac - Confirmed ECK120011265 Nac nac ECK125257196 OmpR - Strong ECK120011265 Nac nac ECK125242743 PdeL - Strong ECK120011265 Nac nac ECK120011306 PhoB - Strong ECK120011265 Nac nac ECK125257195 RcsAB - Strong ECK120011265 Nac nac ECK120011856 SdiA - Strong ECK120011265 Nac nac ECK120013144 SrlR - Strong ECK120011265 Nac nac ECK120013255 TdcA - Strong ECK120011265 Nac nac ECK120013259 TdcR - Strong ECK120011265 Nac nac ECK125286592 UhpA - Strong ECK120011265 Nac nac ECK125228870 UvrY - Strong ECK120011265 Nac nac ECK120013780 XapR - Strong ECK120011265 Nac nac ECK125300414 YdcI + Strong ECK120011265 Nac nac ECK125257203 YefM-YoeB - Strong ECK120011294 H-NS hns ECK120014170 AdiY - Strong ECK120011294 H-NS hns ECK120012987 AppY - Strong ECK120011294 H-NS hns ECK120029348 BolA - Weak ECK120011294 H-NS hns ECK120011250 CadC - Strong ECK120011294 H-NS hns ECK120013805 CaiF - Weak ECK120011294 H-NS hns ECK120013342 CsgD - Strong ECK120011294 H-NS hns ECK120013061 CspA - Confirmed ECK120011294 H-NS hns ECK120011575 EvgA - Strong ECK120011294 H-NS hns ECK125257194 FlhDC + Strong ECK120011294 H-NS hns ECK125141939 FliZ + Weak ECK120011294 H-NS hns ECK120012092 GadE - Strong ECK120011294 H-NS hns ECK125257204 GadE-RcsB - Strong ECK120011294 H-NS hns ECK120011465 GadW - Strong ECK120011294 H-NS hns ECK120011458 GadX - Strong ECK120011294 H-NS hns ECK120013141 GutM + Weak ECK120011294 H-NS hns ECK120011294 H-NS - Confirmed ECK120011294 H-NS hns ECK120012250 HdfR - Strong ECK120011294 H-NS hns ECK120013164 LeuO - Confirmed ECK120011294 H-NS hns ECK120011383 Lrp - Strong ECK120011294 H-NS hns ECK125140737 MazE + Weak ECK120011294 H-NS hns ECK125257200 MazE-MazF + Weak ECK120011294 H-NS hns ECK120011378 NhaR - Weak ECK120011294 H-NS hns ECK125242743 PdeL - Weak ECK120011294 H-NS hns ECK125257195 RcsAB - Strong ECK120011294 H-NS hns ECK120011324 RcsB - Strong ECK120011294 H-NS hns ECK125257193 RcsB-BglJ - Strong ECK120011294 H-NS hns ECK120013144 SrlR + Weak ECK120011294 H-NS hns ECK120034571 StpA - Strong ECK120011294 H-NS hns ECK120012313 YdeO - Strong ECK120011294 H-NS hns ECK125228843 YjjQ - Strong ECK120011298 SoxS soxS ECK125235978 DecR + Strong ECK120011298 SoxS soxS ECK125285350 Fur + Confirmed ECK120011298 SoxS soxS ECK120011412 MarA + Strong ECK120011298 SoxS soxS ECK120013191 MarR + Strong ECK120011298 SoxS soxS ECK120011190 Rob - Strong ECK120011298 SoxS soxS ECK120011298 SoxS - Confirmed ECK120011302 OxyR oxyR ECK125285350 Fur + Confirmed ECK120011302 OxyR oxyR ECK120012802 MetR + Strong ECK120011302 OxyR oxyR ECK120011302 OxyR - Confirmed ECK120011306 PhoB phoB ECK120011202 ArgP + Weak ECK120011306 PhoB phoB ECK120013112 Cra - Weak ECK120011306 PhoB phoB ECK120011941 CusR + Strong ECK120011306 PhoB phoB ECK120026337 FeaR - Strong ECK120011306 PhoB phoB ECK120011465 GadW + Weak ECK120011306 PhoB phoB ECK120011458 GadX + Weak ECK120011306 PhoB phoB ECK120011306 PhoB + Confirmed ECK120011306 PhoB phoB ECK120015234 PrpR - Strong ECK120011306 PhoB phoB ECK125158221 RspR + Strong ECK120011312 CysB cysB ECK120013750 Cbl + Strong ECK120011312 CysB cysB ECK120011312 CysB - Weak ECK120011324 RcsB rcsB ECK120011458 GadX - Confirmed ECK120011324 RcsB rcsB ECK120012313 YdeO + Weak ECK120011328 LrhA lrhA ECK125257194 FlhDC - Strong ECK120011328 LrhA lrhA ECK120013164 LeuO + Strong ECK120011328 LrhA lrhA ECK120011328 LrhA + Strong ECK120011345 ArcA arcA ECK120012987 AppY + Weak ECK120011345 ArcA arcA ECK120011345 ArcA + Strong ECK120011345 ArcA arcA ECK120011670 ArgR + Strong ECK120011345 ArcA arcA ECK120013017 BetI - Strong ECK120011345 ArcA arcA ECK120034476 DpiA + Weak ECK120011345 ArcA arcA ECK120011229 FNR - Weak ECK120011345 ArcA arcA ECK120012092 GadE + Strong ECK120011345 ArcA arcA ECK125257204 GadE-RcsB + Strong ECK120011345 ArcA arcA ECK120011458 GadX + Weak ECK120011345 ArcA arcA ECK120011437 GlcC - Confirmed ECK120011345 ArcA arcA ECK120013830 LldR - Strong ECK120011345 ArcA arcA ECK120012029 PutA - Strong ECK120011345 ArcA arcA ECK125160661 PuuR - Weak ECK120011345 ArcA arcA ECK120033066 RstA + Strong ECK120011345 ArcA arcA ECK120013786 XylR + Weak ECK120011378 NhaR nhaR ECK120011378 NhaR + Confirmed ECK120011383 Lrp lrp ECK125134683 AidB - Strong ECK120011383 Lrp lrp ECK120030264 AlaS - Weak ECK120011383 Lrp lrp ECK120011670 ArgR + Weak ECK120011383 Lrp lrp ECK120011670 ArgR - Weak ECK120011383 Lrp lrp ECK120013750 Cbl + Weak ECK120011383 Lrp lrp ECK120011312 CysB - Weak ECK120011383 Lrp lrp ECK120011465 GadW + Weak ECK120011383 Lrp lrp ECK120011465 GadW - Weak ECK120011383 Lrp lrp ECK120013164 LeuO + Weak ECK120011383 Lrp lrp ECK120013164 LeuO - Weak ECK120011383 Lrp lrp ECK120011328 LrhA + Strong ECK120011383 Lrp lrp ECK120011383 Lrp - Strong ECK120011383 Lrp lrp ECK120012218 MalT + Weak ECK120011383 Lrp lrp ECK120011265 Nac + Weak ECK120011383 Lrp lrp ECK120012277 QseB - Weak ECK120011383 Lrp lrp ECK125336166 RpoN - Weak ECK120011383 Lrp lrp ECK120012253 SlyA + Weak ECK120011383 Lrp lrp ECK120012253 SlyA - Weak ECK120011383 Lrp lrp ECK120011298 SoxS + Weak ECK120011383 Lrp lrp ECK120034571 StpA + Confirmed ECK120011383 Lrp lrp ECK120011194 TyrR + Weak ECK120011383 Lrp lrp ECK120011194 TyrR - Strong ECK120011383 Lrp lrp ECK125336164 YciT + Weak ECK120011383 Lrp lrp ECK120013665 YeiL + Weak ECK120011383 Lrp lrp ECK120051444 YgiV + Weak ECK120011383 Lrp lrp ECK120051444 YgiV - Weak ECK120011383 Lrp lrp ECK125302599 ZntR + Weak ECK120011390 HyfR hyfR ECK120011390 HyfR + Weak ECK120011394 FhlA fhlA ECK120011394 FhlA + Confirmed ECK120011394 FhlA fhlA ECK120011390 HyfR + Weak ECK120011400 PspF pspF ECK120011400 PspF - Confirmed ECK120011412 MarA marA ECK125235978 DecR + Weak ECK120011412 MarA marA ECK120011412 MarA + Confirmed ECK120011412 MarA marA ECK120013191 MarR + Confirmed ECK120011412 MarA marA ECK120012029 PutA + Weak ECK120011412 MarA marA ECK120011190 Rob - Confirmed ECK120011429 IscR iscR ECK120011429 IscR - Confirmed ECK120011437 GlcC glcC ECK120011437 GlcC - Strong ECK120011458 GadX gadX ECK120012092 GadE + Strong ECK120011458 GadX gadX ECK125257204 GadE-RcsB + Strong ECK120011458 GadX gadX ECK120011465 GadW + Weak ECK120011458 GadX gadX ECK120011465 GadW - Strong ECK120011458 GadX gadX ECK120011458 GadX + Strong ECK120011458 GadX gadX ECK120011294 H-NS + Weak ECK120011465 GadW gadW ECK120012092 GadE + Weak ECK120011465 GadW gadW ECK125257204 GadE-RcsB + Weak ECK120011465 GadW gadW ECK120011465 GadW - Weak ECK120011465 GadW gadW ECK120011458 GadX + Strong ECK120011465 GadW gadW ECK120011458 GadX - Strong ECK120011492 PhoP phoP ECK120011312 CysB + Weak ECK120011492 PhoP phoP ECK120012092 GadE + Weak ECK120011492 PhoP phoP ECK125257204 GadE-RcsB + Weak ECK120011492 PhoP phoP ECK120011465 GadW + Strong ECK120011492 PhoP phoP ECK120011492 PhoP + Strong ECK120011492 PhoP phoP ECK120011492 PhoP - Strong ECK120011492 PhoP phoP ECK120033066 RstA + Strong ECK120011492 PhoP phoP ECK120011406 TreR - Confirmed ECK120011492 PhoP phoP ECK120012313 YdeO - Strong ECK120011502 NarL narL ECK120013805 CaiF - Weak ECK120011502 NarL narL ECK125286588 DcuR - Strong ECK120011502 NarL narL ECK120034476 DpiA - Weak ECK120011502 NarL narL ECK125302598 NikR - Weak ECK120011563 PaaX paaX ECK120011563 PaaX - Strong ECK120011575 EvgA evgA ECK120011575 EvgA + Strong ECK120011575 EvgA evgA ECK120012092 GadE + Strong ECK120011575 EvgA evgA ECK125257204 GadE-RcsB + Strong ECK120011575 EvgA evgA ECK120012313 YdeO + Strong ECK120011593 MprA mprA ECK120011593 MprA - Strong ECK120011670 ArgR argR ECK120011670 ArgR - Confirmed ECK120011670 ArgR argR ECK120011383 Lrp - Strong ECK120011670 ArgR argR ECK120034571 StpA - Strong ECK120011824 FadR fadR ECK125286586 AccB + Strong ECK120011824 FadR fadR ECK120011824 FadR + Weak ECK120011824 FadR fadR ECK120011897 IclR + Confirmed ECK120011856 SdiA sdiA ECK120011465 GadW + Weak ECK120011897 IclR iclR ECK120011897 IclR - Confirmed ECK120011903 DnaA dnaA ECK120011903 DnaA + Confirmed ECK120011903 DnaA dnaA ECK120011903 DnaA - Confirmed ECK120011908 NagC nagC ECK120012036 ChbR - Confirmed ECK120011908 NagC nagC ECK120035002 CreB - Weak ECK120011908 NagC nagC ECK120011908 NagC - Confirmed ECK120011938 NorR norR ECK120011938 NorR - Confirmed ECK120011941 CusR cusR ECK120011941 CusR + Confirmed ECK120011949 MngR mngR ECK120011949 MngR - Confirmed ECK120011953 CdaR cdaR ECK120011953 CdaR + Weak ECK120011959 AlsR alsR ECK120011959 AlsR - Weak ECK120012029 PutA putA ECK120012029 PutA - Confirmed ECK120012036 ChbR chbR ECK120012036 ChbR + Strong ECK120012036 ChbR chbR ECK120012036 ChbR - Strong ECK120012075 GlaR glaR ECK120011250 CadC + Strong ECK120012075 GlaR glaR ECK120051451 Dan - Strong ECK120012075 GlaR glaR ECK120011465 GadW - Strong ECK120012075 GlaR glaR ECK120011458 GadX + Strong ECK120012075 GlaR glaR ECK120012465 GcvA - Strong ECK120012075 GlaR glaR ECK120012246 PdhR + Strong ECK120012075 GlaR glaR ECK120012313 YdeO + Strong ECK120012075 GlaR glaR ECK120051444 YgiV - Strong ECK120012075 GlaR glaR ECK125228843 YjjQ - Strong ECK120012075 GlaR glaR ECK125110189 YqhC - Strong ECK120012075 GlaR glaR ECK120014103 ZraR - Strong ECK120012092 GadE gadE ECK120012092 GadE + Strong ECK120012092 GadE gadE ECK125257204 GadE-RcsB + Strong ECK120012092 GadE gadE ECK120011465 GadW + Strong ECK120012092 GadE gadE ECK120011458 GadX + Strong ECK120012092 GadE gadE ECK120011383 Lrp + Weak ECK120012092 GadE gadE ECK125257195 RcsAB + Strong ECK120012096 GntR gntR ECK120012101 IdnR - Strong ECK120012101 IdnR idnR ECK120012101 IdnR + Weak ECK120012141 ExuR exuR ECK120012141 ExuR - Strong ECK120012141 ExuR exuR ECK120012145 UxuR - Weak ECK120012145 UxuR uxuR ECK120012141 ExuR - Strong ECK120012145 UxuR uxuR ECK120012145 UxuR - Weak ECK120012153 UidR uidR ECK120012153 UidR - Weak ECK120012176 TrpR trpR ECK120012176 TrpR - Strong ECK120012246 PdhR pdhR ECK125165914 MraZ - Strong ECK120012246 PdhR pdhR ECK120012246 PdhR - Confirmed ECK120012250 HdfR hdfR ECK125257194 FlhDC - Strong ECK120012253 SlyA slyA ECK120013164 LeuO + Strong ECK120012253 SlyA slyA ECK120012253 SlyA + Confirmed ECK120012277 QseB qseB ECK120011903 DnaA - Strong ECK120012277 QseB qseB ECK120026337 FeaR + Weak ECK120012277 QseB qseB ECK120026337 FeaR - Weak ECK120012277 QseB qseB ECK125257194 FlhDC + Weak ECK120012277 QseB qseB ECK120012277 QseB + Strong ECK120012313 YdeO ydeO ECK120012092 GadE + Strong ECK120012313 YdeO ydeO ECK125257204 GadE-RcsB + Strong ECK120012313 YdeO ydeO ECK120011465 GadW + Strong ECK120012313 YdeO ydeO ECK120011378 NhaR + Strong ECK120012313 YdeO ydeO ECK120012313 YdeO - Weak ECK120012316 AraC araC ECK120012316 AraC + Confirmed ECK120012316 AraC araC ECK120012316 AraC - Confirmed ECK120012337 RhaS rhaS ECK120012877 RhaR + Strong ECK120012337 RhaS rhaS ECK120012877 RhaR ? Strong ECK120012337 RhaS rhaS ECK120012337 RhaS + Strong ECK120012337 RhaS rhaS ECK120012337 RhaS ? Strong ECK120012347 MelR melR ECK120012347 MelR + Confirmed ECK120012347 MelR melR ECK120012347 MelR - Confirmed ECK120012407 CytR cytR ECK120012407 CytR - Confirmed ECK120012465 GcvA gcvA ECK120012465 GcvA - Confirmed ECK120012482 TorR torR ECK120011458 GadX - Weak ECK120012482 TorR torR ECK120012482 TorR - Confirmed ECK120012515 AgaR agaR ECK120012515 AgaR - Confirmed ECK120012595 Ada ada ECK120012595 Ada + Confirmed ECK120012595 Ada ada ECK120012595 Ada - Confirmed ECK120012595 Ada ada ECK125134683 AidB + Strong ECK120012704 GalS galS ECK120012713 GalR - Weak ECK120012704 GalS galS ECK120012704 GalS - Weak ECK120012713 GalR galR ECK120012713 GalR - Strong ECK120012713 GalR galR ECK120012704 GalS - Weak ECK120012770 LexA lexA ECK125257188 DinJ-YafQ - Weak ECK120012770 LexA lexA ECK120012770 LexA - Confirmed ECK120012770 LexA lexA ECK125228870 UvrY - Weak ECK120012802 MetR metR ECK120012802 MetR - Confirmed ECK120012854 PurR purR ECK120012854 PurR - Confirmed ECK120012877 RhaR rhaR ECK120012877 RhaR + Confirmed ECK120012877 RhaR rhaR ECK120012337 RhaS + Confirmed ECK120012965 IlvY ilvY ECK120012965 IlvY - Confirmed ECK120012984 AlpA alpA ECK120011306 PhoB - Weak ECK120013010 AsnC asnC ECK120013010 AsnC - Weak ECK120013017 BetI betI ECK120013017 BetI - Confirmed ECK120013061 CspA cspA ECK120011294 H-NS + Strong ECK120013065 CynR cynR ECK120013065 CynR - Strong ECK120013081 DsdC dsdC ECK120013081 DsdC - Weak ECK120013112 Cra cra ECK120013017 BetI + Weak ECK120013112 Cra cra ECK120011235 CRP + Confirmed ECK120013112 Cra cra ECK125286587 CRP-Sxy + Confirmed ECK120013112 Cra cra ECK120013342 CsgD + Confirmed ECK120013112 Cra cra ECK120011437 GlcC - Weak ECK120013112 Cra cra ECK120011412 MarA - Strong ECK120013112 Cra cra ECK120013191 MarR - Strong ECK120013112 Cra cra ECK125242743 PdeL - Confirmed ECK120013112 Cra cra ECK120012246 PdhR - Strong ECK120013118 FucR fucR ECK120013118 FucR + Weak ECK120013141 GutM gutM ECK120013141 GutM + Weak ECK120013141 GutM gutM ECK120013144 SrlR + Weak ECK120013144 SrlR srlR ECK120013141 GutM - Weak ECK120013144 SrlR srlR ECK120013144 SrlR - Weak ECK120013164 LeuO leuO ECK120011250 CadC - Weak ECK120013164 LeuO leuO ECK120013164 LeuO + Confirmed ECK120013164 LeuO leuO ECK120013164 LeuO - Confirmed ECK120013164 LeuO leuO ECK125257193 RcsB-BglJ + Strong ECK120013164 LeuO leuO ECK125228843 YjjQ + Strong ECK120013175 LysR lysR ECK120013175 LysR - Weak ECK120013191 MarR marR ECK120011412 MarA - Confirmed ECK120013191 MarR marR ECK120013191 MarR - Confirmed ECK120013229 RbsR rbsR ECK120013229 RbsR - Confirmed ECK120013242 SoxR soxR ECK120013242 SoxR - Confirmed ECK120013242 SoxR soxR ECK120011298 SoxS + Confirmed ECK120013255 TdcA tdcA ECK120013255 TdcA + Strong ECK120013259 TdcR tdcR ECK120013255 TdcA + Strong ECK120013342 CsgD csgD ECK120013342 CsgD + Strong ECK120013342 CsgD csgD ECK125141939 FliZ - Strong ECK120013406 MalI malI ECK120013406 MalI - Confirmed ECK120013665 YeiL yeiL ECK120013665 YeiL + Weak ECK120013786 XylR xylR ECK120012316 AraC - Strong ECK120013786 XylR xylR ECK120013786 XylR + Strong ECK120013830 LldR lldR ECK120013830 LldR + Confirmed ECK120013830 LldR lldR ECK120013830 LldR - Confirmed ECK120014044 PlaR plaR ECK120014044 PlaR - Confirmed ECK120014103 ZraR zraR ECK120012141 ExuR + Strong ECK120014103 ZraR zraR ECK120011465 GadW + Strong ECK120014103 ZraR zraR ECK120014103 ZraR + Confirmed ECK120014170 AdiY adiY ECK120011458 GadX + Strong ECK120015234 PrpR prpR ECK120015234 PrpR - Weak ECK120015243 HcaR hcaR ECK120015243 HcaR - Strong ECK120015630 AllR allR ECK120015636 AllS - Confirmed ECK120015681 LsrR lsrR ECK120015681 LsrR - Confirmed ECK120015687 BaeR baeR ECK120015687 BaeR + Confirmed ECK120015690 DhaR dhaR ECK120015690 DhaR - Weak ECK120015994 AcrR acrR ECK120015994 AcrR - Confirmed ECK120015994 AcrR acrR ECK125257194 FlhDC - Weak ECK120015994 AcrR acrR ECK120011412 MarA - Strong ECK120015994 AcrR acrR ECK120013191 MarR - Strong ECK120015994 AcrR acrR ECK120013242 SoxR - Strong ECK120015994 AcrR acrR ECK120011298 SoxS - Strong ECK120016814 NsrR nsrR ECK120013081 DsdC - Weak ECK120016814 NsrR nsrR ECK120026337 FeaR - Weak ECK120016814 NsrR nsrR ECK120011394 FhlA - Weak ECK120016814 NsrR nsrR ECK125141939 FliZ - Strong ECK120016814 NsrR nsrR ECK125257183 IHF - Weak ECK120016814 NsrR nsrR ECK120011383 Lrp - Weak ECK120016814 NsrR nsrR ECK120011938 NorR - Weak ECK120020634 PepA pepA ECK120020634 PepA - Strong ECK120026318 AscG ascG ECK120015234 PrpR - Confirmed ECK120026325 HipB hipB ECK125257201 HipAB - Confirmed ECK120026325 HipB hipB ECK120026325 HipB - Confirmed ECK120026325 HipB hipB ECK125140737 MazE - Strong ECK120026325 HipB hipB ECK125257200 MazE-MazF - Strong ECK120029345 DicA dicA ECK120029345 DicA + Confirmed ECK120029348 BolA bolA ECK120013342 CsgD + Weak ECK120030264 AlaS alaS ECK120030264 AlaS - Confirmed ECK120030724 ArsR arsR ECK120030724 ArsR - Strong ECK120032161 SgrR sgrR ECK120032161 SgrR - Confirmed ECK120033010 RcnR rcnR ECK120033010 RcnR - Strong ECK120033066 RstA rstA ECK120013342 CsgD - Strong ECK120033905 RutR rutR ECK120011465 GadW - Strong ECK120033905 RutR rutR ECK120011458 GadX - Strong ECK120033905 RutR rutR ECK120035042 NemR - Strong ECK120033905 RutR rutR ECK120033905 RutR - Confirmed ECK120034476 DpiA dpiA ECK120012987 AppY - Weak ECK120034476 DpiA dpiA ECK120034476 DpiA + Confirmed ECK120034571 StpA stpA ECK120013164 LeuO - Weak ECK120034571 StpA stpA ECK120034571 StpA - Weak ECK120035042 NemR nemR ECK120035042 NemR - Strong ECK120048826 MurR murR ECK120048826 MurR + Weak ECK120048826 MurR murR ECK120048826 MurR - Weak ECK120048934 RelB relB ECK120048934 RelB - Confirmed ECK120048934 RelB relB ECK125257202 RelB-RelE - Confirmed ECK120051444 YgiV ygiV ECK120051441 McbR - Strong ECK120051451 Dan ttdR ECK120051451 Dan + Strong ECK120051460 MqsA mqsA ECK120013342 CsgD - Strong ECK120051460 MqsA mqsA ECK120051460 MqsA - Confirmed ECK125134665 MlrA mlrA ECK120011250 CadC + Strong ECK125134665 MlrA mlrA ECK120013342 CsgD + Strong ECK125134683 AidB aidB ECK125134683 AidB - Strong ECK125134855 NfeR nfeR ECK125134855 NfeR - Confirmed ECK125135147 YefM yefM ECK125135147 YefM - Confirmed ECK125135147 YefM yefM ECK125257203 YefM-YoeB - Confirmed ECK125140737 MazE mazE ECK125140737 MazE - Strong ECK125140737 MazE mazE ECK125257200 MazE-MazF - Strong ECK125141911 MatA matA ECK125257194 FlhDC - Strong ECK125141911 MatA matA ECK125141939 FliZ - Strong ECK125141911 MatA matA ECK125141911 MatA + Strong ECK125141939 FliZ fliZ ECK120013342 CsgD - Strong ECK125141939 FliZ fliZ ECK125257194 FlhDC - Strong ECK125141939 FliZ fliZ ECK120012092 GadE - Confirmed ECK125141939 FliZ fliZ ECK125257204 GadE-RcsB - Confirmed ECK125141939 FliZ fliZ ECK125134665 MlrA - Confirmed ECK125145850 BtsR btsR ECK120013342 CsgD - Strong ECK125145850 BtsR btsR ECK120012246 PdhR - Strong ECK125145855 BasR basR ECK120013342 CsgD + Strong ECK125145855 BasR basR ECK120012029 PutA - Strong ECK125145855 BasR basR ECK120012277 QseB + Strong ECK125158217 RcdA rcdA ECK120013342 CsgD + Strong ECK125158217 RcdA rcdA ECK125158217 RcdA + Confirmed ECK125158270 PgrR pgrR ECK120011194 TyrR - Strong ECK125160661 PuuR puuR ECK125160661 PuuR - Confirmed ECK125165914 MraZ mraZ ECK125165914 MraZ - Confirmed ECK125202685 SutR sutR ECK125141939 FliZ - Strong ECK125202685 SutR sutR ECK125202685 SutR + Confirmed ECK125202685 SutR sutR ECK125202685 SutR - Strong ECK125228798 HprR hprR ECK120011941 CusR + Strong ECK125228822 NimR nimR ECK125228822 NimR - Confirmed ECK125228840 YebK yebK ECK125228840 YebK - Strong ECK125228843 YjjQ yjjQ ECK125257194 FlhDC - Strong ECK125230705 CecR cecR ECK125230705 CecR - Confirmed ECK125242732 HigA higA ECK125242732 HigA - Strong ECK125242732 HigA higA ECK125257189 HigB-HigA - Strong ECK125242743 PdeL pdeL ECK125242743 PdeL + Confirmed ECK125257182 YhaJ yhaJ ECK125257182 YhaJ + Weak ECK125257183 IHF ihfA,ihfB ECK120013342 CsgD + Strong ECK125257183 IHF ihfA,ihfB ECK120011229 FNR + Confirmed ECK125257183 IHF ihfA,ihfB ECK120011394 FhlA + Strong ECK125257183 IHF ihfA,ihfB ECK120011186 Fis + Confirmed ECK125257183 IHF ihfA,ihfB ECK125257194 FlhDC - Weak ECK125257183 IHF ihfA,ihfB ECK125141939 FliZ - Strong ECK125257183 IHF ihfA,ihfB ECK125257201 HipAB + Weak ECK125257183 IHF ihfA,ihfB ECK120026325 HipB + Weak ECK125257183 IHF ihfA,ihfB ECK125257183 IHF - Strong ECK125257183 IHF ihfA,ihfB ECK125257196 OmpR - Confirmed ECK125257183 IHF ihfA,ihfB ECK120014044 PlaR - Strong ECK125257183 IHF ihfA,ihfB ECK120013255 TdcA + Confirmed ECK125257183 IHF ihfA,ihfB ECK120013665 YeiL + Weak ECK125257185 FrmR frmR ECK125257185 FrmR - Strong ECK125257188 DinJ-YafQ dinJ,yafQ ECK125257188 DinJ-YafQ - Confirmed ECK125257189 HigB-HigA higA,higB ECK125242732 HigA - Strong ECK125257189 HigB-HigA higA,higB ECK125257189 HigB-HigA - Strong ECK125257192 NtrC glnG ECK120013750 Cbl + Weak ECK125257192 NtrC glnG ECK120011265 Nac + Weak ECK125257192 NtrC glnG ECK125257192 NtrC + Confirmed ECK125257192 NtrC glnG ECK125257192 NtrC - Confirmed ECK125257193 RcsB-BglJ bglJ,rcsB ECK120013164 LeuO + Strong ECK125257194 FlhDC flhC,flhD ECK125141939 FliZ + Confirmed ECK125257195 RcsAB rcsA,rcsB ECK120013342 CsgD - Weak ECK125257195 RcsAB rcsA,rcsB ECK125257194 FlhDC - Confirmed ECK125257195 RcsAB rcsA,rcsB ECK125257195 RcsAB + Confirmed ECK125257196 OmpR ompR ECK120015994 AcrR + Strong ECK125257196 OmpR ompR ECK120029348 BolA - Strong ECK125257196 OmpR ompR ECK120011250 CadC - Strong ECK125257196 OmpR ompR ECK120013342 CsgD + Confirmed ECK125257196 OmpR ompR ECK125257194 FlhDC - Weak ECK125257196 OmpR ompR ECK120012246 PdhR + Strong ECK125257196 OmpR ompR ECK120011190 Rob + Strong ECK125257200 MazE-MazF mazE,mazF ECK125140737 MazE - Strong ECK125257200 MazE-MazF mazE,mazF ECK125257200 MazE-MazF - Strong ECK125257201 HipAB hipA,hipB ECK125257201 HipAB - Strong ECK125257201 HipAB hipA,hipB ECK120026325 HipB - Strong ECK125257201 HipAB hipA,hipB ECK125140737 MazE - Strong ECK125257201 HipAB hipA,hipB ECK125257200 MazE-MazF - Strong ECK125257202 RelB-RelE relB,relE ECK120048934 RelB - Confirmed ECK125257202 RelB-RelE relB,relE ECK125257202 RelB-RelE - Confirmed ECK125257203 YefM-YoeB yefM,yoeB ECK125135147 YefM - Confirmed ECK125257203 YefM-YoeB yefM,yoeB ECK125257203 YefM-YoeB - Confirmed ECK125257204 GadE-RcsB gadE,rcsB ECK120011458 GadX + Confirmed ECK125285348 DgoR dgoR ECK125285348 DgoR - Confirmed ECK125285349 CsqR csqR ECK125285349 CsqR - Confirmed ECK125285350 Fur fur ECK120011229 FNR - Weak ECK125285350 Fur fur ECK125257194 FlhDC - Weak ECK125285350 Fur fur ECK125285350 Fur - Strong ECK125285350 Fur fur ECK125302602 MetJ - Weak ECK125285350 Fur fur ECK120011265 Nac - Weak ECK125285350 Fur fur ECK120012854 PurR - Weak ECK125285350 Fur fur ECK120013242 SoxR - Weak ECK125285350 Fur fur ECK120011298 SoxS - Weak ECK125286586 AccB accB ECK125286586 AccB - Weak ECK125286587 CRP-Sxy crp,sxy ECK125286587 CRP-Sxy + Weak ECK125286588 DcuR dcuR ECK120034476 DpiA + Strong ECK125286590 HicB hicB ECK125286590 HicB - Confirmed ECK125302598 NikR nikR ECK125302598 NikR - Strong ECK125302601 FrlR frlR ECK125302601 FrlR - Confirmed ECK125302602 MetJ metJ ECK120012802 MetR - Strong ECK125336162 YfeC yfeC ECK125336162 YfeC + Weak