# Copies and Copyright-Notice # # RegulonDB is free for academic/noncommercial use # # User is not entitled to change or erase data sets of the RegulonDB # database or to eliminate copyright notices from RegulonDB. Furthermore, # User is not entitled to expand RegulonDB or to integrate RegulonDB partly # or as a whole into other databank systems, without prior written consent # from CCG-UNAM. # # Please check the license at http://regulondb.ccg.unam.mx/menu/download/full_version/terms_and_conditions.jsp # # Citation # # Tierrafrķa, V. H. et al. (2022). RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12, # Microb Genom. 2022 May;8(5). doi: 10.1099/mgen.0.000833. PMID: 35584008. https://doi.org/10.1099/mgen.0.000833 # # # Contact # # Person: RegulonDB Team # Web Page: http://regulondb.ccg.unam.mx/menu/about_regulondb/contact_us/index.jsp # (regulondb@ccg.unam.mx) # # # Release: 11.2 Date: 05/22/2023 # ___________________________________________________________________________ # Created: 06/12/2023 13:17:01 # # Columns: # (1) Sigma Factor name # (2) TUName (regulated) # (3) Regulatory Function of the TF on the regulated gene (+ activator, - repressor, +- dual, ? unknown) # (4) Evidence that supports the existence of the regulatory interaction # (5) RI confidence level based on its evidence (Values: Confirmed, Strong, Weak) # Sigma24 ahpF[ahpFp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bacA[bacAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bamA[bamAp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bamA-hlpA-lpxD-fabZ-lpxAB-rnhB-dnaE[bamAp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bamB-der[bamBp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bamC[bamCp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bamD[bamDp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bamD[bamDp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bamE[bamEp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 bepA-yfgD[bepAp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 clpX-lon[clpXp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 cyaR[cyaRp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma24 degP[degPp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 dolP[dolPp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 dolP[dolPp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 dsbC[dsbCp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 dsbC-recJ-prfB[dsbCp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ecpR[ecpRp] + [COMP-AINF] Weak Sigma24 eptB[eptBp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 essD-ybcS-rzpD[essDp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 fadM[fadMp1] + [COMP-AINF] Weak Sigma24 fkpA[fkpAp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ftnB[ftnBp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 fusA-tufA[fusAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 greA[greAp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 gspAB[gspAp4] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 hcp-hcr[hcpp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 hlpA-lpxD-fabZ-lpxA[hlpAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 hokE[hokEp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma24 htrG-cca[ygiMp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ibaG[ibaGp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma24 imp-surA-pdxA[impp3] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 insK[insKp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma24 lgoR[lgoRp4] + [COMP-AINF] Weak Sigma24 lhr[lhrp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 lptAB[lptAp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 lptB-rpoN-hpf-ptsN-yhbJ[lptBp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 lpxD[lpxDp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 lpxP[lpxPp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 malQ[malQp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 mdoGH[opgGp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 micA[micAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 micL[micLp1] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 narWV[narWp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 phoQ[phoQp5] + [COMP-AINF] Weak Sigma24 plsB[plsBp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 psd-mscM[psdp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rclABC[rclAp] + [COMP-AINF] Weak Sigma24 rfaDFCL[rfaDp4] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rnlB[rnlBp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rpoD[rpoDp4] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rpoE-rseABC[rpoEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rpoH[rpoHp3] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rseABC[rseAp3] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rseP[rsePp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rutR[rutRp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 rybB[rybBp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 sbmA-yaiW[sbmAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 sixA[sixAp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 surA-pdxA-rsmA-apaGH[surAp] + [AS-NAS, EXP-TAS] Weak Sigma24 wzbc[wzap2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ybaB-recR[ybaBp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ybfHG[ybfHp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ycfR[bhsAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IEP] Weak Sigma24 ydhIJK[ydhIp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ydiV[ydiVp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma24 yeaY[yeaYp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yfeKS[yfeKp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yfeYX[yfeYp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yggN[yggNp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yggN[yggNp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yghF[yghFp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ygiM[ygiMp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yhjJ[yhjJp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yiaKLMNO-lyx-sgbHUE[yiaKp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yicJI[yicJp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yidQ[yidQp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yieEF[yieEp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yiiS-uspD[yiiSp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 yoaC[yoaCp1] + [COMP-AINF] Weak Sigma24 yqjA-mzrA[yqjAp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma24 ytfJ[ytfJp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 aer[aerp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 flgK[flgKp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma28 flgMN[flgMp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma28 fliAZY[fliAp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 fliC[fliCp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma28 fliDST[fliDp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma28 fliE[fliEp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 fliFGHIJK[fliFp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 fliLMNOPQR[fliLp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 flxA[flxAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 hemL[hemLp] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 hemL[hemLp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma28 hemL[hemLp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma28 lolB-ispE-prs[lolBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 modABC[modAp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma28 motRAB-cheAW[motRp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 oppABCDF[oppAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, AS-NAS] Weak Sigma28 ppdAB-ygdB-ppdC-recC[ppdAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 rdcAB[rdcAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma28 rdcAB[rdcAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma28 tar-tap-cheRBYZ[tarp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 trg[trgp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma28 tsr[tsrp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 ves[vesp] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma28 ycgR[ycgRp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 yecF[yecFp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 ygbK[ygbKp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 yhiL[yhiLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF] Weak Sigma28 yhjH[yhjHp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma28 yjcS[yjcSp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION] Weak Sigma28 ykfBF-yafX-ykfGH-yafW-ykfI[ykfBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma28 ykfBF-yafX-ykfGH-yafW-ykfI[ykfBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma28 ynjH[ynjHp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma28 ynjH[ynjHp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma32 ackA[ackAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 adiC[adiCp7] + [COMP-AINF] Weak Sigma32 alaA[alaAp9] + [COMP-AINF] Weak Sigma32 bssS[bssSp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP] Weak Sigma32 bssS[bssSp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 can[canp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IDA, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION)] Strong Sigma32 casDE-ygbTF[casDp] + [EXP-IDA, EXP-IEP] Weak Sigma32 clpB[clpBp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 clpPX[clpPp3] + [COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 cra[fruRp8] + [COMP-AINF] Weak Sigma32 creABC[creAp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 dnaKJ[dnaKp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 dnaKJ[dnaKp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 dnaKJ[dnaKp3] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 fxsA[fxsAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 gapA-yeaD[gapAp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 glnS[glnSp] + [COMP-AINF, EXP-IDA] Weak Sigma32 groSL[groSp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR] Strong Sigma32 grpE[grpEp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 hepA[rapAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 hfq-hflXKC[hfqp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 holC-valS[holCp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 hslR-hslO[hslRp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 hslVU[hslVp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 hspQ[hspQp] + [EXP-IDA, EXP-IEP] Weak Sigma32 htgA[htgAp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 htpG[htpGp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 htpG[htpGp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 htpX[htpXp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ibpAB[ibpAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ileS-lspA-fkpB-ispH[ileSp3] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 lapAB[lapAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ldhA[ldhAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP] Weak Sigma32 lon[lonp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR] Strong Sigma32 metA[metAp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 mhpT[mhpTp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 miaA-hfq-hflXKC[miaAp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 mlc-ynfK[mlcp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 mngAB[mngAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, IC, COMP-AINF] Weak Sigma32 mutL-miaA-hfq-hflXKC[mutLp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 mutM[mutMp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 nanXY[yjhBp2] + [COMP-AINF] Weak Sigma32 narP[narPp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 nfuA[nfuAp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 osmF-yehYXW[osmFp2] + [EXP-IDA, EXP-IEP] Weak Sigma32 pgpC-tadA[pgpCp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 phoPQ[phoPp3] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 pncC[pncCp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ppiD[ppiDp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 prlC-yhiQ[prlCp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR] Strong Sigma32 ptsHI-crr[ptsHp5] + [EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ptsHI-crr[ptsHp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 raiAZ[raiAp] + [EXP-IDA, EXP-IEP] Weak Sigma32 rdgB-yggW[rdgBp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 rfaDFCL[rfaDp3] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ribE-nusB-thiL-pgpA[ribEp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 rlmE-ftsH[rlmEp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 rnlA[rnlAp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma32 rpmE[rpmEp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IDA, EXP-IEP] Weak Sigma32 rpoD[rpoDp3] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 rrsA-ileT-alaT-rrlA-rrfA[rrsAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 rrsB-gltT-rrlB-rrfB[rrsBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 rrsC-gltU-rrlC-rrfC[rrsCp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF[rrsDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 rrsE-gltV-rrlE-rrfE[rrsEp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 rrsG-gltW-rrlG-rrfG[rrsGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 rrsH-ileV-alaV-rrlH-rrfH[rrsHp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma32 sdaA[sdaAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 sdsR-pphA[pphAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 slt[sltp7] + [COMP-AINF] Weak Sigma32 topA[topAp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IMP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 trmA[trmAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 xerD-dsbC-recJ[xerDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma32 yafDE[yafDp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 yafU[yafUp] + [EXP-IDA, EXP-IEP] Weak Sigma32 ybbN[ybbNp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP] Weak Sigma32 ybeD-lipB[ybeDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR] Strong Sigma32 ybeZYX-lnt[ybeZp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ybfE[ybfEp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma32 yccE[yccEp] + [EXP-IDA, EXP-IEP] Weak Sigma32 yceJI[yceJp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma32 yciSM-pyrF-yciH[lapAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ycjXF-tyrR[ycjXp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 ycjY[ycjYp6] + [COMP-AINF] Weak Sigma32 ycjY-ymjDC-mpaA[ycjYp6] + [COMP-AINF] Weak Sigma32 ydeO[ydeOp] + [EXP-IDA, EXP-IEP] Weak Sigma32 ydhQ[ydhQp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 yehR[yehRp] + [EXP-IDA, EXP-IEP] Weak Sigma32 yfbR[yfbRp3] + [COMP-AINF] Weak Sigma32 yfjV[yfjVp] + [EXP-IDA, EXP-IEP] Weak Sigma32 ygbF[ygbFp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 yhdN-zntR[yhdNp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 yiaA[yiaAp] + [EXP-IDA, EXP-IEP] Weak Sigma32 yibA[yibAp] + [EXP-IDA, EXP-IEP] Weak Sigma32 yjaZ[yjaZp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma32 yjhIHG[yjhIp] + [COMP-AINF-PATTERN-DISCOVERY, EXP-IDA, EXP-IEP, EXP-IMP] Weak Sigma32 yjiT[yjiTp] + [EXP-IDA, EXP-IEP] Weak Sigma32 yrdA[yrdAp] + [EXP-IDA, EXP-IEP] Weak Sigma32 yrfG-hslR[yrfGp] + [EXP-IDA, EXP-IEP] Weak Sigma38 aceEF[aceEp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma38 acnA[ymiCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 acs-yjcHG[acsp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 ada-alkB[adap2] + [COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 adhE[adhEp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 adhE[adhEp] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 adrA[adrAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 aidB[aidBp2] + [COMP-AINF, EXP-IDA, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 aldB[aldBp] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 alkA[alkAp2] + [COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR] Strong Sigma38 ansP[ansPp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ansP[ansPp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 appCBA-yccB[appCp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 appY[appYp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 araFGH[araFp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 araFGH[araFp3] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 arrS[arrSp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma38 artPIQM[artPp1] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 artPIQM[artPp2] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 artPIQM[artPp3] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 asr[asrp2] + [COMP-HINF, COMP-AINF, EXP-IMP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 astCADBE[astCp3] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 blc[blcp] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 blr[blrp] + [EXP-IEP, EXP-IPI, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 bolA[bolAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 bsmA[bsmAp] + [COMP-HINF, EXP-IDA, AS-NAS] Weak Sigma38 btsT[yjiYp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 cbpA-cbpM[cbpAp] + [COMP-HINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 cbpAM[cbpAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 cfa[cfap2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 cfa[cfap] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 cpxRA[cpxRp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IEP] Weak Sigma38 crr[crrpI] + [EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 csgBAC[csgBp2] + [COMP-HINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 csgDEFG[csgDp3] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 csgDEFG[csgDp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 csiD-ygaF-gabDTP[csiDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 csiE[csiEp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 csrA[csrAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 cyaR[cyaRp3] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma38 ddpXABCDF[ddpXp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP] Weak Sigma38 ddpXABCDF[ddpXp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP] Weak Sigma38 dhaKLM[dhaKp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 dhaR[dhaRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 dinB-yafNOP[dinBp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma38 dkgB[dkgBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 dnaN-recF[dnaNp5] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 dnaN-recF[dnaNp6] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 dnaN-recF[dnaNp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 dps[dpsp2] + [COMP-AINF, EXP-IEP, EXP-IPI, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ecnB[ecnBp] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 elaB[elaBp] + [COMP, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 eno[enop5] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 eno[enop8] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 epd-pgk[epdp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma38 epd-pgk-fbaA[epdp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma38 evgAS[evgAp1] + [COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 fadL[fadLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 fbaB[fbaBp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 frdABCD[frdAp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ftsQ[ftsQp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ftsQAZ[ftsQp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 fumC[fumCp2] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gabDTP[gabDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gabDTP[gabDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gadAX[gadAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gadBC[gadBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gadEF[gadEp1] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gadEF-mdtEF[gadEp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gadX[gadXp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gadXW[gadXp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gadY[gadYp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 galE[galEp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 galET[galEp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 galETK[galEp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 galETKM[galEp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 gapA[gapAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma38 glgCAP[glgCp3] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 glgS[glgSp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 glgS[glgSp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 glk[glkp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 glk[glkp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma38 glsA-ybaT[glsAp] + [EXP-IEP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gltBDF[gltBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 gor[gorp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma38 gpmA[gpmAp4] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 gpmA[gpmAp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 gpmM-envC-yibQ[gpmMp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 gyrB[gyrBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 hchA[hchAp2] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 hdeAB-yhiD[hdeAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 hdeD[hdeDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IEP, EXP-IPI, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 hdfR[hdfRp] + [COMP-HINF, COMP-AINF] Weak Sigma38 hmp[hmpp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 hofMNOP[hofMp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 hyaABCDEF[hyaAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ihfA[ihfAp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ihfB[ihfBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ilvY[ilvYp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 insC5CD5D5-yqiHIG[insC-5p] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 iraD[idlPp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 katE[katEp] + [COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 kbp[kbpp4] + [COMP-AINF] Weak Sigma38 ldcC[ldcCp] + [EXP-IEP, EXP-IMP, AS-TAS] Weak Sigma38 lsrACDBFG-tam[lsrAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 luxS[luxSp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 mdtABCD-baeSR[mdtAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 metK[metKp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IEP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 mglBAC[mglBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP] Weak Sigma38 micF[micFp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IEP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 mlrA[mlrAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 mnmG-rsmG[mnmGp2] + [EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 mnt-btuF-yadS[mtnp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 mpl[mplp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 msyB[msyBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 murQP[murQp] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 murR[murRp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 mutS[mutSp] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 narU[narUp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 nhaAR[nhaAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ompF[ompFp2] + [EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 osmB[osmBp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 osmB[osmBp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 osmC[osmCp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 osmE[osmEp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 osmF-yehYXW[osmFp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 osmY[osmYp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 otsA[otsAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 otsBA[otsBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 otsBA[otsBp2] + [COMP-HINF, COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 oxyR[oxyRp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 patA[patAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pcnB-folK[pcnBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pcnB-folk[pcnBp4] + [COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pdeR[pdeRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pdhR-aceEF-lpdA[pdhRp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma38 pfkA[pfkAp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 pfkA[pfkAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma38 pfkB[pfkBp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pfkB[pfkBp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pgi[pgip2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma38 poxB[poxBp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma38 ppk-ppx[ppkp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 pqiABC[pqiAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pqiABC[pqiAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 proP[proPp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 proVWX[proVp] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pstB-phoU[pstBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pstCAB-phoU[pstCp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pstS[pstSp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pstSCA[pstSp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pstSCAB-phoU[pstSp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 puuAP[puuAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 puuCBE[puuCp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 puuDRCBE[puuDp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 pykA[pykAp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 pykA[pykAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 pykF[pykFp4] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 pykF[pykFp5] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 ravA-viaA[ravAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 rhaSR[rhaSp2] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 rpoE-rseABC[rpoEp4] + [COMP-HINF, EXP-IEP, EXP-IPI, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 rpoH[rpoHp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 rraA[rraAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Confirmed Sigma38 rsd[rsdp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 rssAB[rssAp] + [COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 rssB[rssBp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ryjA[ryjAp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sdsN[sdsNp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sdsN[sdsNp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sdsR[sdsRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sdsR-pphA[sdsRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sgrST-setA[sgrSp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sodC[sodCp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma38 sohB[sohBp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 speB[speBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 speC[speCp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 sra[srap] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ssrS[ssrSp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ssrS-ygfA[ssrSp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sucAB[sucAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 sucABCD-sdhX[sucAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 talA-tktB[talAp1] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 talA-tktB[talAp2] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 tam[tamp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 tktB[tktBp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 tolC-ygiBC[tolCp4] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 topA[topAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 tpiA[tpiAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 treA[treAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 treF[treFp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 uspB[uspBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 wrbA-yccJ[wrbAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 xapAB[xapAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 xthA[xthAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yabI[yabIp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma38 yadV-htrE[yadVp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ybgA-phr[ybgAp1] + [COMP-HINF, COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ybgA-phr[ybgAp2] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ybiI[ybiIp6] + [COMP-HINF, COMP-AINF, EXP-IDA] Weak Sigma38 ybjP[ybjPp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ycgZ-ymgA-ariR-ymgC[ycgZp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yciG[yciGp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 yciGFE[yciGp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 yciT[yciTp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 yciZT[yciZp] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ydbD[ydbDp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma38 ydbK-ompN[ydbKp4] + [COMP-HINF, COMP-AINF, EXP-IDA] Weak Sigma38 ydcSTUV-patD[ydcSp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA] Weak Sigma38 yddG[yddGp] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 ydhYVWXUT[ydhYp] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yeiL[yeiLp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yffO-yffP[yffOp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 yggE[yggEp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yggE[yggEp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yhfG-fic-pabA[yhfGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IMP, EXP-IPI, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma38 yhiM[yhiMp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IPI] Weak Sigma38 yhjG[yhjGp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 yiaG[yiaGp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yihG[yihGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 yjcC[yjcCp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IEP] Weak Sigma38 ynfB-speG[ynfBp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IEP, EXP-IPI] Weak Sigma38 ynfEFGH-dmsD[ynfEp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma38 ytfK[ytfKp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma38 znuA[znuAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma38 null[insN-1p] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IEP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma38 null[csrAp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IPI, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma38 null[dkgAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IEP] Weak Sigma54 acrD[acrDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 actP[actPp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 argT-hisJQMP[argTp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma54 aslB[aslBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 astCADBE[astCp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma54 atoDAEB[atoDp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP] Weak Sigma54 chaC[chaCp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma54 dcuD[dcuDp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma54 ddpXABCDF[ddpXp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 emrD[emrDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 fdhF[fdhFp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 flhDC[flhDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 glmY[glmYp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 glnA[glnAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 glnALG[glnAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 glnHPQ[glnHp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 glnK-amtB[glnKp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma54 glpQ[glpQp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma54 gltI-sroC-gltJKL[gltIp2] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION] Weak Sigma54 gnsA[gnsAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma54 htpG[htpGp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 hycABCDEFGHI[hycAp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 hydN-hypF[hydNp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 hyfABCDEFGHIJR-focB[hyfAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 hypABCDE[hypAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 hypABCDE-fhlA[hypAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 ibpB[ibpBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 nac[nacp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 nikABCDER[nikAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 norVW[norVp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 patA[patAp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 potFGHI[potFp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma54 prpBCDE[prpBp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma54 pspABCDE[pspAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 pspG[pspGp] + [COMP, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma54 puuP[puuPp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 radD[radDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 relA[relAp3] + [COMP-HINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 relA[relAp4] + [EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 rhaD[rhaDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 rpoE-rseABC[rseDp] + [COMP-HINF, EXP-IDA, EXP-IEP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 rpoH[rpoHp6] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IMP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma54 rtcBA[rtcBp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 rtcR[rtcRp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION] Weak Sigma54 rutABCDEFG[rutAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 xapB[xapBp3] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma54 xdhABC[xdhAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma54 yaaU[yaaUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 yahE[yahEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma54 yeaGH[yeaGp1] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma54 ygfK-ssnA[ygfKp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 yhdWXYZ[yhdWp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION] Weak Sigma54 yhjC[yhjCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma54 zraP[zraPp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma54 zraSR[zraSp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 accA[accAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 accBC[accBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 accD[accDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aceBAK[aceBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aceEF[aceEp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 acnA[acnAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 acnA[acnAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 acnB[acnBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 acpP[acpPp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 acpP-fabF[acpPp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 acrAB[acrAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 acrD[acrDp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 acrEF[acrEp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 acrR[acrRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 acrZ[acrZp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 acs-yjcHG[acsp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 acs-yjcHG[acsp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 ada-alkB[adap] + [COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 add[addp6] + [COMP-AINF] Weak Sigma70 ade[adep] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 adhE[adhEp1] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 adiA[adiAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 agaR[agaRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 agaSYBCDI[agaSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ahpCF[ahpCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ahpCF[ahpCp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aidB[aidBp1] + [COMP-AINF, EXP-IDA, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 alaC[alaCp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 alaE[alaEp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 alaWX[alaWp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 aldA[aldAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 alkA[alkAp] + [COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR] Strong Sigma70 alkB[alkBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 allB[allBp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 allB[allBp3] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 allB[allBp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 allDC-ylbA[allDp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 alsRBACE[alsRp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 alsRBACE[alsRp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 amiA-hemF[amiAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ampC[ampCp] + [COMP-AINF, EXP-IMP, RS-EPT-CBR] Strong Sigma70 amyA[amyAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ansB[ansBp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 appCBA-yccB[appCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 appY[appYp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 appY[appYp3] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 apt[aptp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 araBAD[araBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 araC[araCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 araE[araEp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 araE-ygeA[araEp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 araFGH[araFp1] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 araJ[araJp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arcA[arcAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arcA[arcAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arcA[arcAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arcA[arcAp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arcA[arcAp6] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arcA[arcAp7] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arcA[arcAp5] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arfA[arfAp3] + [COMP-HINF, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 argA[argAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 argCBH[argCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 argD[argDp] + [COMP-AINF, RS-EPT-CBR, AS-TAS] Strong Sigma70 argE[argEp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 argF[argFp] + [COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 argG[argGp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 argI[argIp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 argO[argOp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 argR[argRp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 argS[argSp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 argU[argUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 argW[argWp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 argX-hisR-leuT-proM[argXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IMP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 aroD[aroDp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroF-tyrA[aroFp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroG[aroGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 aroH[aroHp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroH[aroHp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroKB-damX-dam-rpe-gph-trpS[aroKp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroKB-damX-dam-rpe-gph-trpS[aroKp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroL-yaiA-aroM[aroLp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroM[aroMp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 aroP[aroPp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aroP[aroPp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 arrS[arrSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP] Weak Sigma70 arsRBC[arsRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 artJ[artJp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 artPIQM[artPp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ascFB[ascFp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 asnA[asnAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 asnC[asnCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 asnC-mioC[asnCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 asnC-mioC-mnmG[asnCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 asnT[asnTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 asnU[asnUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 asnV[asnVp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 aspA[aspAp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aspA-dcuA[aspAp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 aspV[aspVp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 asr[asrp] + [COMP-HINF, COMP-AINF, EXP-IMP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 astCADBE[astCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 atpIBEFHAGDC[atpIp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 azoR[azoRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 azuC[azuCp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 bcp[bcpp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 bcsBZ[bcsBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 bcsEFG[bcsEp1] + [COMP-HINF, IC, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 bdcA[bdcAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 betIBA[betIp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 betT[betTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 bglX[bglXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 bhsA[bhsAp9] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 bioA[bioAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 bioBFCD[bioBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 bluF[bluFp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 bluR[bluRp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 bolA[bolAp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 bolA[bolAp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 bssS[bssSp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 btuB-murI[btuBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 btuD[btuDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 btuE[btuEp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 btuE[btuEp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 cadBA[cadBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cadC[cadCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 caiF[caiFp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 caiTABCDE[caiTp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 can[canp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-IDA, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 carAB[carAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 carAB[carAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cas3[cas3p] + [COMP-HINF] Weak Sigma70 casABCDE12[casAp] + [COMP-AINF, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cbl[cblp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cbpA-cbpM[cbpAp6] + [COMP-HINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cbpA-cbpM[cbpAp4] + [COMP-HINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cbpAM[cbpAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 ccmABCDEFGH[ccmAp] + [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cdd[cddp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cecR-ybhGFSR[cecRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IPI] Weak Sigma70 cedA[cedAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 cfa[cfap1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 chiA[chiAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 chiX[chiXp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cho[chop] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 chpSB[chpSp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 chpSB[chpSp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cirA[cirAp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cirA[cirAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 clpA[clpAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 clpB[clpBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 clpPX[clpPp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cmk-rpsA[cmkp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cobUST[cobUp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma70 cobUST[cobUp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 codBA[codBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 copA[copAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 corA[corAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 cpdB[cpdBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cpxPQ[cpxPp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 cpxRA[cpxRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 creABCD[creAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 crp[crpp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 csgA[csgAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 csgBAC[csgBp] + [COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 csgDEFG[csgDp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 csgDEFG[csgDp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 csiE[csiEp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cspA[cspAp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 cspA[cspAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cspB[cspBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cspD[cspDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cspE[cspEp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cspE[cspEp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 csrA[csrAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 csrA[csrAp5] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IPI, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 csrA[csrAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 csrB[csrBp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Confirmed Sigma70 cstA[cstAp3] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cstA[cstAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cusCFBA[cusCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cusRS[cusRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cutA[cutAp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cvpA-purF-ubiX[cvpAp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 cyaA[cyaAp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cyaA[cyaAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cyaR[cyaRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 cydAB[cydAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cydAB[cydAp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cydAB[cydAp5] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cydAB[cydAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cydAB[cydAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cydDC[cydDp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cynR[cynRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cynTS[cynTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cynTSX[cynTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cyoABCDE[cyoAp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cysB[cysBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 cysDNC[cysDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cysG[cysGp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 cysJIH[cysJp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cysK[cysKp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cysPUWAM[cysPp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 cytR[cytRp] + [AS-HYPO, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dacC[dacCp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 dadAX[dadAp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dadAX[dadAp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dadAX[dadAp3] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dam-rpe-gph-trpS[damp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dam-rpe-gph-trpS[damp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 damX-dam-rpe-gph-trpS[damXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dapA-nlpB[dapAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dapB[dapBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dapB[dapBp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dapD[dapDp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dapE-ypfN[dapEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma70 dctA[dctAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dcuA[dcuAp1] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dcuB-fumB[dcuBp1] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dcuD[dcuDp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 dcuR[dcuRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dcuSR[dcuSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 decR[decRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 def-fmt[defp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 degQ[degQp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 degS[degSp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 deoBD[deoBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 deoCABD[deoCp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 deoCABD[deoCp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dgcZ[dgcZp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 dgoRKADT[dgoRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma70 dicB-ydfDE-insD-intQ[dicBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-TAS] Weak Sigma70 dicC-ydfXW[dicCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dinB-yafNOP[dinBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma70 dinG-ybiB[dinGp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 dinI[dinIp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 dinJ-yafQ[dinJp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 dinQ[dinQp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dksA-gluQ[dksAp3] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dksA-yadB[dksAp2] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dmsABC[dmsAp1] + [COMP-AINF, AS-NAS, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dmsC[dmsCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 dnaAN-recF[dnaAp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dnaN-recF[dnaNp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dnaN-recF[dnaNp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dnaN-recF[dnaNp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dnaN-recF[dnaNp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dppABCDF[dppAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 dps[dpsp] + [COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dsbA[dsbAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dsdA[dsdAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dsdC[dsdCp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 dsdXA[dsdXp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dsrA[dsrAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 dusB-fis[dusBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 dut-slmA[dutp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ebgAC[ebgAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ecpA[ecpAp] + [COMP-AINF] Weak Sigma70 edd-eda[eddp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 efeU[efeUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 efp[efpp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 emrRAB[mprAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 eno[enop4] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 eno[enop7] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 entCEBA-ybdB[entCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 entS[entSp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 entS[entSp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 epd-pgk[epdp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 epd-pgk-fbaA[epdp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 eptB[eptBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 esrE[esrEp] + [COMP-HINF, EXP-IMP-SITE-MUTATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IMP-SITE-MUTATION)] Confirmed Sigma70 evgAS[evgAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 exbBD[exbBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 exuR[exuRp2] + [EXP-IDA, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fabA[fabAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 fabB[fabBp] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fadBA[fadBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fadD-sroD[fadDp] + [COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fadIJ[fadIp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 fadR[fadRp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fdnGHI[fdnGp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 feaB[feaBp1] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 feaB[feaBp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 feaR[feaRp1] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 feaR[feaRp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 feaR[feaRp3] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fecIR[fecIp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 feoABC[feoAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 fepA-entD[fepAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fepB[fepBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fepDGC[fepDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fepDGC[fepDp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fes-ybdZ-entF-fepE[fesp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fhuACDB[fhuAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 fhuF[fhuFp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 fhuF[fhuFp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 fimAICDFGH[fimAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fimB[fimBp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fimE[fimEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fiu[fiup] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 fixABCX[fixAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fldB[fldBp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 flgAMN[flgAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 flgBCDEFGHIJ[flgBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA] Weak Sigma70 flhBAE[flhBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA, AS-TAS] Weak Sigma70 flhDC[flhDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fliAZY[fliAp1] + [COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fliDST[fliDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA] Weak Sigma70 fliE[fliEp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA] Weak Sigma70 fliFGHIJK[fliFp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 fliLMNOPQR[fliLp1] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fnr[fnrp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 fnrS[fnrSp] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 focA-pflB[focAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 focA-pflB[focAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 focA-pflB[focAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 folA[folAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 folE-yeiB[folEp] + [COMP, COMP-AINF] Weak Sigma70 fpr[fprp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 frc[frcp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 frdABCD[frdAp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 frlABCDR[frlAp1] + [COMP-AINF, EXP-IMP] Weak Sigma70 frlR[frlRp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 frlR[frlRp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 frr[frrp] + [COMP-HINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 frsA[frsAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR] Strong Sigma70 fruBKA[fruBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ftnA[ftnAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR] Strong Sigma70 ftnB[ftnBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ftsAZ[ftsAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ftsK[ftsKp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ftsK[ftsKp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ftsQAZ[ftsQp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fucAO[fucAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 fucO[fucOp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fucPIKUR[fucPp] + [COMP-AINF, AS-NAS] Weak Sigma70 fucU[fucUp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 fumA[fumAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fumAC[fumAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fumB[fumBp] + [COMP, COMP-AINF] Weak Sigma70 fumC[fumCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, AS-TAS] Weak Sigma70 fur[furpb] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 fur[furpa] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gabDTP[gabDp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gadAX[gadAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gadBC[gadBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gadE-mdtEF[gadEp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gadEF[gadEp3] + [COMP-AINF, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 galE[galEp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galE[galEp2] + [COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galET[galEp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galET[galEp2] + [COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galETK[galEp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galETK[galEp2] + [COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galETKM[galEp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-AINF, EXP-IDA, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galETKM[galEp2] + [COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 galP[galPp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, AS-NAS, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 galR[galRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 galS[galSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gapA[gapAp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 gapA[gapAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gapA[gapAp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 garPLRK-rnpB[garPp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, IC, COMP-AINF] Weak Sigma70 gatYZABCD[gatYp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gcd[gcdp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gcl-hyi-glxR-ybbVW-allB-ybbY-glxK[gclp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 gcvA[gcvAp] + [AS-HYPO, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gcvB[gcvBp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gcvR[gcvRp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gcvR[gcvRp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gcvTHP[gcvTp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gdhA[gdhAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 gfcA[gfcAp] + [COMP-HINF, IC, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glcC[glcCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glcDEFGBA[glcDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glgAP[glgAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glgBXCAP[glgBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glgCAP[glgCp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glk[glkp4] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 glk[glkp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 glmUS[glmUp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glmUS[glmUp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glmY[glmYp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glmZ[glmZp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glnA[glnAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glnALG[glnAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glnB[glnBp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glnB[glnBp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glnLG[glnLp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glnQ[glnQp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 glnS[glnSp2] + [COMP-AINF, EXP-IDA] Weak Sigma70 gloA[gloAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 glpABC[glpABCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 glpD[glpDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glpFKX[glpFp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glpTQ[glpTQp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 glrK[glrKp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gltA[gltAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gltBDF[gltBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gltIJKL-sroC[gltIp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, IC, COMP-AINF] Weak Sigma70 gltX[gltXp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gltX[gltXp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gltX[gltXp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 glyA[glyAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 glyQS[glyQp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 glyU[glyUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 glyVXY[glyVp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 glyW-cysT-leuZ[glyWp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 gmk[gmkp] + [COMP-AINF, RS-EPT-CBR, AS-TAS] Strong Sigma70 gnd[gndp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gnsA[gnsAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 gntK[gntKp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gntKU[gntKp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gntP[gntPp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gntR[gntRp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gntT[gntTp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gntXY[gntXp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 gor[gorp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma70 gpmA[gpmAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 gpmA[gpmAp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 gpt[gptp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 grcA[grcAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IMP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 greA[greAp1] + [COMP-HINF, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 groSL[groSp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR] Strong Sigma70 grxB[grxBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 grxD[grxD] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 gsk[gskp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gspAB[gspAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gspAB[gspAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gspCDEFGHIJKLMO[gspCp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gspCDEFGHIJKLMO[gspCp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 guaBA[guaBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gyrA[gyrAp] + [COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 gyrB[gyrBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hchA[hchAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hdeAB-yhiD[hdeAp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hdeD[hdeDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hemA-prfA-prmC[hemAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hemB[hemBp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hemF[hemFp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hemH[hemHp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hemN[hemNp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hflD-purB[hflDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hfq-hflXKC[hfqp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hfq-hflXKC[hfqp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hicAB[hicAp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hicAB[hicAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 higBA[higBp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hipBA[hipBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hisBHAFI[hisBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hisJQMP[hisJp] + [COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hisS[hisSp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hiuH[hiuHp] + [COMP-AINF] Weak Sigma70 hns[hnsp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Confirmed Sigma70 hpt[hptp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hscBA-fdx-iscX[hscBp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hslJ[hslJp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hupB[hupBp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hupB[hupBp3] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hyaABCDEF[hyaAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 hybOABCDEFG[hybOp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 hypF[hypFp1] + [EXP-IDA] Weak Sigma70 hypF[hypFp2] + [COMP-AINF, EXP-IDA] Weak Sigma70 hypF[hypFp3] + [COMP-AINF, EXP-IDA] Weak Sigma70 ibsC[ibsCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ibsD[ibsDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 icd[icdAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 icd[icdAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 idnK[idnKp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 idnR[idnRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION] Weak Sigma70 ihfB[ihfBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ileS-lspA-fkpB-ispH[ileSp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ileX[ileXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ilvC[ilvCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvIH[ilvIp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvIH[ilvIp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvIH[ilvIHp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-TAS, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvL[ilvLp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvL[ilvLp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvLXG_1G_2MEDA[ilvLp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvLXG_1G_2MEDA[ilvLp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ilvY[ilvYp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 imp[impp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 imp[impp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 inaA[inaAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 infA[infAp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 infA[infAp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 infB[infBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 infC-rpmI-rplT[infCp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 intS[intSp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 iraD[iraDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 iraD[iraDp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 iraM[iraMp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 iraP[iraPp1] + [COMP-HINF, COMP-AINF, AS-NAS, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 iscRSUA[iscRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 isrC-flu[flup] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 istR-1[istR-1p] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 istR-2[istR-2p] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ivbL[ivbLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ivbL-ilvBN[ivbLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 katG[katGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kbaZ-agaVWA[kbaZp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kbl-tdh[kblp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kdpFABC[kdpFp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kdsA[kdsAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kdsC-lptCAB[kdsCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kdsC-lptCAB[kdsCp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kdsC-lptCAB[kdsCp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 kdtA-coaD[waaAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lacZYA[lacZp1] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lapAB[lapAp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lapAB[lapAp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ldtC[ldtCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 leuL[leuLp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 leuLABCD[leuLp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 leuO[leuOp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 leuQPV[leuQp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 leuU[leuUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 leuX[leuXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 lexA-dinF[lexAp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lgt[lgtp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lgt-thyA[lgtp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 livJ[livJp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 livKHMGF[livKp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lldPRD[lldPp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lolA-rarA[lolAp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lon[lonp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR] Strong Sigma70 lpdA[lpdAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lptAB[lptAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lpxC[lpxCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, AS-NAS] Weak Sigma70 lpxT[lpxTp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 lrp[lrpp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lsp-fkpB-ispH[lspAp] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lsrRK[lsrRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IEP] Weak Sigma70 lysA[lysAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 lysC[lysCp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lysC[lysCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lysO[lysOp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lysP[lysPp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 lysR[lysRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 lysT-valT-lysW[lysTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 lysU[lysUp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 malEFGH[malEp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 malI[malIp] + [COMP-AINF, EXP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 malK-lamB-malM[malKp] + [COMP-AINF, EXP-IMP, EXP-TAS] Weak Sigma70 malPQ[malPp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, RS-EPT-CBR] Strong Sigma70 malS[malSp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 malT[malTp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 malXY[malXp] + [COMP, COMP-AINF, EXP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 malY[malYp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 manA[manAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 manXYZ[manXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 marRAB[marRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma70 mcbA[mcbAp5] + [COMP-AINF] Weak Sigma70 mdh[mdhp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mdoGH[opgGp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mdoGH[opgGp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mdtUJI[mdtJp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 melAB[melAp] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 melR[melRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 menA-rraA[menAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mepH[mepHp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 metA[metAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metBL[metBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metC[metCp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 metF[metFp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metG[metGp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 metG[metGp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metH[metHp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 metH[metHp2] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metJ[metJp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metJ[metJp3] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metK[metKp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metNIQ[metNp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP, COMP-AINF, RS-EPT-CBR] Strong Sigma70 metT-leuW-glnUW-metU-glnVX[metTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 metY[metYp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metY[metYp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metY-yhbC-nusA-infB[metYp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp[metYp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metY-yhbC-nusA-infB-rbfA-truB-rpsO-pnp[metYp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 metZWV[metZp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mfd[mfdp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mfd[mfdp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mglAC[mglAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 mglBAC[mglBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP] Weak Sigma70 mgrR[mgrRp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mgtA[mgtAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mgtA[mgtAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mgtS[mgtSp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mhpABCDFE[mhpAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mhpR-lacI[mhpRp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mhpR-lacI[mhpRp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 miaA-hfq-hflXKC[miaAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 micC[micCp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Confirmed Sigma70 micF[micFp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mlc[mlcp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mlc-ynfK[mlcp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mlrA[mlrAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mltF[mltFp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 mngB[mngBp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 mngR[mngRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 mnmG-rsmG[mnmGp] + [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mnt-btuF-yadS[mtnp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mntH[mntHp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mntP[mntPp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 modABC[modAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 moeAB[moeAp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mpl[mplp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 mpl[mplp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 mqsA[mqsAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mqsA[mqsAp1] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mqsRA[mqsRp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mqsRA[mqsRp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mraZW-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC[mraZp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mreB[mreBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mreB[mreBp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mreBCD[mreBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mreBCD[mreBp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mrp[mrpp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 msrB[msrBp6] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mtlADR[mtlAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 mtr[mtrp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 murQP[murQp1] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 murQP[murQp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 murR[murRp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 mutL-miaA-hfq-hflXKC[mutLp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nadB[nadBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 nadE[nadEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nagBACD[nagBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nagC[nagCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nagC[nagCp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nagE[nagEp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nanA[nanAp] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nanATEK-yhcH[nanAp] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nanY[nanYp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 nanY[nanYp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 napFDAGHBC-ccmABCDEFGH[napFp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 napFDAGHBC-ccmABCDEFGH[napFp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 narGHJI[narGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 narK[narKp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 narK[narKp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 narU[narUp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 narXL[narXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ndh[ndhp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nei[neip] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 nemRA[nemRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nemRA-gloA[nemRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nfeF[yqjHp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 nfo[nfop] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nfsB[nfsBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 nhaAR[nhaAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nirBDC-cysG[nirBp] + [COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nlpD-rpoS[nlpDp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nlpD-rpoS[nlpDp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nohA-stfQ-tfaQ[nohAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION] Weak Sigma70 nrdAB-yfaE[nrdAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nrdDG[nrdDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nrdHIEF[nrdHp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nrdR-ribDE-nusB-thiL-pgpA[nrdRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 nrfABCDEFG[nrfAp] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nudB-yebC-ruvC[nudBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 nuoABCEFGHIJKLMN[nuoAp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nupC[nupCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nupG[nupGp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 nusA-infB[nusAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ohsC[ohsCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ompA[ompAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ompC[ompCp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Confirmed Sigma70 ompF[ompFp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ompN[ompNp] + [IC, COMP-AINF] Weak Sigma70 ompR-envZ[ompRp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ompR-envZ[ompRp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ompR-envZ[ompRp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ompR-envZ[ompRp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 osmB[osmBp2] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 osmC[osmCp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 osmE[osmEp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 osmY[osmYp] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 oxyR[oxyRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 oxyS[oxySp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 paaABCDEFGHIJK[paaAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 paaXY[paaXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pabA[pabAp] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 panBC[panBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR] Strong Sigma70 panD[panDp2] + [COMP-HINF, IC, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 patZ[pkap] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, EXP-TAS] Weak Sigma70 pck[pckp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IMP] Weak Sigma70 pcnB-folK[pcnBp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pcnB-folK[pcnBp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pcnB-folK[pcnBp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pdeL[pdeLp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IDA, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pdeL[pdeLp2] + [COMP-AINF, EXP-IDA] Weak Sigma70 pdeL[pdeLp3] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pdhR-aceEF-lpdA[pdhRp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 pepA[pepAp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pepA[pepAp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pepA[pepAp3] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pepD[pepDp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pfkA[pfkAp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 pfkA[pfkAp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pflA[pflAp] + [AS-HYPO, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pgi[pgip] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 pgk[pgkp1] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pgk[pgkp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pgk-fbaA[pgkp1] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pgk-fbaA[pgkp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pgpB[pgpBp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pheLA[pheLp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pheP[phePp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pheU[pheUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 pheV[pheVp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 phnCDEEFGHIJKLMNOP[phnCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 phoA-psiF[phoAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, AS-NAS] Weak Sigma70 phoBR[phoBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, AS-NAS] Weak Sigma70 phoE[phoEp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 phoH[phoHp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 phoU[phoUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pitB[pitBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 plaR[plaRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pldA[pldAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 plsX-fabHDG[plsXp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pncB[pncBp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pnp[pnpp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pntAB[pntAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 polB[polBp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 poxB[poxBp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 ppdD-hofBC[ppdDp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ppiA[ppiAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ppiA[ppiAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ppiA[ppiAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ppiA[ppiAp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ppiD[ppiDp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ppsA[ppsAp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pqiABC[pqiAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pqiABC[pqiAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 preTA[preTp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 prfC[prfCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 proK[proKp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 proL[proLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 proP[proPp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 proS[proSp] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 proVWX[proVp1] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 proVWX[proVp3] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 proVWX[proVp2] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 prpR[prpRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 prs[prsp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 psiE[psiEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 psiF[psiFp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 pspF[pspFp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pspF[pspFp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pspF[pspFp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pssA[pssAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 pstB-phoU[pstBp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 pstB-phoU[pstBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pstCAB-phoU[pstCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pstS[pstSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pstSCA[pstSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pstSCAB-phoU[pstSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pta[ptap] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pth-ychF[pthp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ptrA[ptrAp] + [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ptrA-recBD[ptrAp] + [EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ptsG[ptsGp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ptsHI-crr[ptsHp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ptsHI-crr[ptsHp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purA[purAp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purC[purCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purEK[purEp] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purHD[purHp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purL[purLp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purMN[purMp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purR[purRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 purT[purTp] + [COMP-AINF-PATTERN-DISCOVERY, IC, COMP-AINF, EXP-IMP] Weak Sigma70 putA[putAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 putP[putPp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 putP[putPp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pykA[pykAp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pykA[pykAp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pykF[pykFp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 pykF[pykFp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IDA, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pykF[pykFp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 pyrC[pyrCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pyrD[pyrDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pyrF-yciH[pyrFp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 pyrH[pyrHp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 qseBC[qseBp2] + [COMP-AINF, EXP-IDA] Weak Sigma70 qseBC[qseBp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rapA[rapAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rapA-rluA[rapAp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rbn[rbnp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rbsDACBKR[rbsDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rcnAB[rcnAp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rcnR[rcnRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rcsA[rcsAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rcsB[rcsBp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rcsB[rcsBp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rcsDB[rcsDp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rdlD[rdlDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 recA[recAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 recAX[recAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 recC[recCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 recN[recNp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 recQ[recQp] + [COMP-HINF] Weak Sigma70 relA-mazEF[relAp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 relA-mazEF[relAp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IMP-SITE-MUTATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IMP-SITE-MUTATION), CV(EXP-IMP-SITE-MUTATION/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IMP-SITE-MUTATION/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 relBE-hokD[relBp] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rep[repp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, IC, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rfaDFCL[rfaDp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rfaYZ[waaYp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rfe-wzzE-wecBC-rffGHC-wecE-wzxE-wecF-wzyE-rffM[rfep] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rhaBAD[rhaBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rhaSR[rhaSp] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rhaT[rhaTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ribA[ribAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ribA[ribAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ribF-ileS-lspA-fkpB-ispH[ribFp] + [COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 rihB[rihBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rimK-ybjN[rimKp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP] Weak Sigma70 rimP-nusA-infB[rimPp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 rirA-rfaQGPSBIJYZ-waaU[rirAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 rlmE-ftsH[rlmEp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rnb[rnbp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rnb[rnbp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rnc-era[rncp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rnc-era-recO-pdxJ-acpS[rncp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rnd[rndp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rne[rnep1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rne[rnep2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rne[rnep3] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rnlAB[rnlAp2] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rnlB[rnlBp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpiB[rpiBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rplU-rpmA[rplUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rplU-rpmA-yhbE-obgE[rplUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpmI-rplT[rpmIp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 rpoD[rpoDp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoD[rpoDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoE-rseABC[rpoEp2a] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoE-rseABC[rpoEp1b] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoE-rseABC[rpoEp2b] + [COMP-HINF, EXP-IDA, EXP-IEP, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoE-rseABC[rpoEp5] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoH[rpoHp5] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoH[rpoHp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoH[rpoHp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoN-hpf-ptsN-yhbJ-npr[rpoNp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rpoS[rpoSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpoZ-spoT-trmH-recG[rpoZp] + [COMP-AINF, RS-EPT-CBR, AS-TAS] Strong Sigma70 rpsA-ihfB[rpsAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpsA-ihfB[rpsAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpsB-tsf[rpsBp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 rpsF-priB-rpsR-rplI[rpsFp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 rpsJ-rplCDWB-rpsS-rplV-rpsC-rplP-rpmC-rpsQ[rpsJp] + [COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma70 rpsMKD-rpoA-rplQ[rpsMp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 rpsP-rimM-trmD-rplS[rpsPp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rpsU[rpsUp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 rpsU-dnaG-rpoD[rpsUp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 rpsU-dnaG-rpoD[rpsUp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 rpsU-dnaG-rpoD[rpsUp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IMP, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 rraB[rraBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rrsA-ileT-alaT-rrlA-rrfA[rrsAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rrsA-ileT-alaT-rrlA-rrfA[rrsAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 rrsB-gltT-rrlB-rrfB[rrsBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rrsB-gltT-rrlB-rrfB[rrsBp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rrsC-gltU-rrlC-rrfC[rrsCp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rrsC-gltU-rrlC-rrfC[rrsCp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF[rrsDp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF[rrsDp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rrsE-gltV-rrlE-rrfE[rrsEp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rrsE-gltV-rrlE-rrfE[rrsEp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rrsG-gltW-rrlG-rrfG[rrsGp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rrsG-gltW-rrlG-rrfG[rrsGp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rrsH-ileV-alaV-rrlH-rrfH[rrsHp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 rrsH-ileV-alaV-rrlH-rrfH[rrsHp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 rsd[rsdp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rutR[rutRp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma70 ruvC[ruvCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 rybA-mntS[rybAp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 rydC[rydCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ryeA[ryeAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ryfD[ryfDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ryhB[yhhXp5] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Strong Sigma70 ryjB[ryjBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 safA-ydeO[safAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sbcDC[sbcDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 sdhCDAB-sucABCD-sdhX[sdhCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sdhDAB[sdhDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sdiA[sdiAp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sdiA[sdiAp1] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sdiA[sdiAp3] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sdiA[sdiAp4] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sdiA[sdiAp1b] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 secB-gpsA[secBp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 secG-leuU[secGp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 secG-leuU[secGp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 serA[serAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 serA[serAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 serC[serCp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 serC-aroA[serCp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 serT[serTp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 serU[serUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 serV-argVYZQ[serVp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 serW[serWp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 serW[serWp1] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 serX[serXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 sfsA-dksA[sfsAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 sgrR-sroA-thiBPQ[sgrRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 sgrST-setA[sgrSp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 shiA[shiAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 shoB[shoBp] + [AS, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sibA[sibAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sibB[sibBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sibD[sibDp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sibE[sibEp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sixA[sixAp] + [COMP-AINF-SIMILAR-TO-CONSENSUS, COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 slp-dctR[slpp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 smtA-mukFEB[cmoMp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 sodA[sodAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sodB[sodBp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Confirmed Sigma70 sohA-yhaV[sohAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 sohB[sohBp1] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 sohB[sohBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 sokB[sokBp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sokC[sokCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 soxR[soxRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 soxS[soxSp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 speAB[speAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 speD[speDp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 speE[speEp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 spf[spfp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, EXP-IMP, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 spy[spyp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sraG[sraGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 srkA-dsbA[srkAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 srlAEBD-gutM-srlR-gutQ[srlAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssb[ssbp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssb[ssbp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssb[ssbp3] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssnA[ssnAp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssrA[ssrAp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssrS[ssrSp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 ssrS[ssrSp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssrS-ygfA[ssrSp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, COMP-AINF, EXP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Confirmed Sigma70 ssrS-ygfA[ssrSp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ssuEADCB[ssuEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 stpA[stpAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 stpA[stpAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sufABCDSE[sufAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 sulA[sulAp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 sutR[sutRp] + [COMP-HINF, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 symE[symEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, AS-TAS] Weak Sigma70 symR[symRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, AS-TAS, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tatABC[tatAp1] + [COMP-AINF, RS-EPT-CBR] Strong Sigma70 tatABC[tatAp1] + [COMP-AINF, RS-EPT-CBR] Strong Sigma70 thrL[thrLp] + [COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 thrLABC[thrLp] + [COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 thrU-tyrU-glyT-thrT-tufB[thrUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP] Weak Sigma70 thrW[thrWp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 thyA[thyAp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tnaC[tnaCp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tnaCAB[tnaCp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tomB-hha[tomBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tonB[tonBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 topA[topAp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 topA[topAp3] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 topA[topAp4] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 topA[topAp5] + [COMP-HINF-SIMILAR-TO-CONSENSUS, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 torCAD[torCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 torR[torRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tpiA[tpiAp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF)] Strong Sigma70 tppB[tppBp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tpx[tpxp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 treBC[treBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 treR[treRp2] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 treR[treRp3] + [EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 treR[treRp4] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 treR[treRp1] + [COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trpCBA[trpCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trpL[trpLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trpLEDCBA[trpLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trpR[trpRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 trpS[trpSp] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trxA[trxAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trxA[trxAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trxA[trxAp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 trxC[trxCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tsr[tsrp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 tsx[tsxp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tsx[tsxp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ttdABT[ttdAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 tufA[tufAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tufA[tufAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tynA[tynAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 tyrB[tyrBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 tyrP[tyrPp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tyrR[tyrRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 tyrTV-tpr[tyrTp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IMP, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-RNA-POLYMERASE-FOOTPRINTING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-RNA-POLYMERASE-FOOTPRINTING)] Confirmed Sigma70 ubiCA[ubiCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ubiG[ubiGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 udp[udpP] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ugpBAECQ[ugpBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ugpBAECQ[ugpBp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uhpT[uhpTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uidR[uidRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ulaABCDEF[ulaAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 umpG-pcm[surEp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 umuDC[umuDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 upp-uraA[uppp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uspA[uspAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uvrA[uvrAp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uvrB[uvrBp3] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uvrB[uvrBp2] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uvrB[uvrBp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uvrC[uvrCp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uvrD[uvrDp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uvrYC[uvrYp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uxaB[uxaBp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uxaCA[uxaCp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 uxuAB[uxuAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 uxuR[uxuRp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 valS[valSp1] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 valS[valSp2] + [COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 valUXY-lysV[valUp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 valVW[valVp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 waaA[waaAp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 waaA[waaAp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 wza-wzb-wzc-wcaAB[wzap1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 xapAB[xapAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 xapB[xapBp2] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 xapB[xapBp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 xapR[xapRp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 xapR[xapRp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 xerD-dsbC-recJ[xerDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma70 xseA[xseAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR] Strong Sigma70 xseB-ispA-dxs-yajO[xseBp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 xylE[xylEp] + [COMP-AINF-PATTERN-DISCOVERY, IC, COMP-AINF, EXP-IMP] Weak Sigma70 yacC-speED[yacCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yadV-htrE[yadVp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yadV-htrE[yadVp3] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yafNOP[yafNp] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yagK[yagKp6] + [COMP-AINF] Weak Sigma70 yajG[yajGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yajG-ampG[yajGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ybdN[ybdNp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ybeD-lipB[ybeDp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, RS-EPT-CBR] Strong Sigma70 ybhL[ybhLp] + [COMP-HINF, IC, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ybjC-nfsA-rimK-ybjN[ybjCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ycaR-kdsB[ycaRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yccA[yccAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yccR[sxyp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ycdT[ycdTp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ycdZ[ycdZp4] + [COMP-AINF] Weak Sigma70 yceJI[yceJp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA] Weak Sigma70 ycgZ-ymgA-ariR-ymgC[ycgZp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ychF[ychFp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ychH[ychHp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, RS-EPT-CBR, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF-POSITIONAL-IDENTIFICATION)] Strong Sigma70 ychO[ychOp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ychQA-kdsA[ychQp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yciCB[yciCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yciE[yciEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yciSM-pyrF-yciH[lapAp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yciW[yciWp] + [COMP-AINF-POSITIONAL-IDENTIFICATION] Weak Sigma70 ydeI[ydeIp5] + [COMP-AINF] Weak Sigma70 ydeJ[ydeJp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 ydeNM[ydeNp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ydeP[ydePp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ydfABC[ydfAp8] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ydjM[ydjMp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yeaE[yeaEp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yeaR-yoaG[yeaRp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yebB[yebBp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yebC-ruvC[yebCp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yebE[yebEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yebG[yebGp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yefM-yoeB[yefMp] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yegRZ[yegRp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yehF[yehFp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yfdX[yfdXp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yffB-dapE-ypfN[yffBp] + [EXP-IDA] Weak Sigma70 yfgG[yfgGp] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF)] Confirmed Sigma70 yfiR-dgcN-yfiB[yfiRp] + [COMP-HINF, IC, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ygeH[ygeHp10] + [COMP-AINF] Weak Sigma70 ygfB-pepP-ubiHI[ygfBp] + [COMP-HINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yggG[loiPp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yhdT-panF-prmA[yhdTp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yhfA[yhfAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yhhY[yhhYp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yhjA[yhjAp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yhjR[yhjRp] + [COMP-HINF, IC, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yhjX[yhjXp] + [COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yiaKLMNO-lyx-sgbHUE[yiaKp1] + [COMP-AINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yibD[yibDp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 yibN-grxC-secB-gpsA[yibNp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yifL-dapF-yigA-xerC-yigB[yifLp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yihI[yihIp] + [COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yihUTS[yihUp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 yihUTS[yihUp2] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 yihUTS[yihUp4] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 yihUTS[yihUp3] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 yihUTS[yihUp5] + [COMP-AINF-POSITIONAL-IDENTIFICATION, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 yihV-csqR[yihVp1] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 yihW[csqRp] + [COMP-HINF, EXP-IPI, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, EXP-IEP-RNA-SEQ] Strong Sigma70 yjbE[yjbEp1] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yjbEFGH[yjbEp1] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yjbEFGH[yjbEp2] + [COMP-HINF, COMP-AINF, EXP-IEP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yjeFE-amiB-mutL-miaA-hfq-hflXKC[yjeFp1] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 yjeFE-amiB-mutL-miaA-hfq-hflXKC[yjeFp2] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 yjeFE-amiB-mutL-miaA-hfq-hflXKC[yjeFp3] + [EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP, COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING, CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-AINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF), CV(EXP-IDA-TRANSCRIPTION-INIT-MAPPING/EXP-IDA-HPT-TRANSCR-INIT-M-RACE-MAP/COMP-HINF-POSITIONAL-IDENTIFICATION)] Confirmed Sigma70 yjeV[yjeVp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yjjQ-bglJ[yjjQp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yjjZ[yjjZp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ykgMO[ykgMp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 ykgR[ykgRp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yliM-ompX[yliMp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ymiA-yciX[ymiAp] + [COMP-HINF, IC, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ynfEFGH-dmsD[ynfEp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF, EXP-IDA-RNA-POLYMERASE-FOOTPRINTING] Strong Sigma70 yoaE[yoaEp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yobF-cspC[yobFp1] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yojI[yojIp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, COMP-AINF] Weak Sigma70 yqhD-dkgA[yqhDp] + [COMP-HINF, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yqjA-mzrA[yqjAp1] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yrbG-kdsD[yrbGp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yrbG-kdsDC-lptCAB[yrbGp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yrbN-deaD[yrbNp1] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 yrbN-deaD[yrbNp2] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-HINF, EXP-IMP, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 ysgA[ysgAp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-AINF] Weak Sigma70 zinT[zinTp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 zntA[zntAp] + [COMP-HINF-POSITIONAL-IDENTIFICATION, COMP-AINF, RS-EPT-CBR, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 znuCB[znuCp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 zwf[zwfp] + [COMP-AINF, EXP-IDA-TRANSCRIPTION-INIT-MAPPING] Strong Sigma70 null[rplVp] + [COMP-AINF-POSITIONAL-IDENTIFICATION, COMP-HINF] Weak