# Copies and Copyright-Notice # # RegulonDB is free for academic/noncommercial use # # User is not entitled to change or erase data sets of the RegulonDB # database or to eliminate copyright notices from RegulonDB. Furthermore, # User is not entitled to expand RegulonDB or to integrate RegulonDB partly # or as a whole into other databank systems, without prior written consent # from CCG-UNAM. # # Please check the license at http://regulondb.ccg.unam.mx/menu/download/full_version/terms_and_conditions.jsp # # Citation # # Tierrafrķa, V. H. et al. (2022). RegulonDB 11.0: Comprehensive high-throughput datasets on transcriptional regulation in Escherichia coli K-12, # Microb Genom. 2022 May;8(5). doi: 10.1099/mgen.0.000833. PMID: 35584008. https://doi.org/10.1099/mgen.0.000833 # # # Contact # # Person: RegulonDB Team # Web Page: http://regulondb.ccg.unam.mx/menu/about_regulondb/contact_us/index.jsp # (regulondb@ccg.unam.mx) # # # Release: 11.2 Date: 05/22/2023 # ___________________________________________________________________________ # Created: 06/12/2023 13:14:43 # # Columns: # (1) Transcription Factor (TF) Name # (2) Operon regulated by TF [operon genes] # (3) Regulatory Function of the TF on the regulated gene (+ activator, - repressor, +- dual, ? unknown) # (4) Evidence that supports the existence of the TFBS # (5) Evidence of the function of the Regulatory interaction (RI) # (6) RI confidence level based on its evidence (Values: Confirmed, Strong, Weak) # AaeR aaeXAB[aaeA, aaeB, aaeX] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AccB accBC[accB, accC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak AcrR acrAB[acrA, acrB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AcrR acrR[acrR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AcrR flhDC[flhC, flhD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AcrR marRAB[marA, marB, marR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AcrR micF[micF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak AcrR soxR[soxR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AcrR soxS[soxS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Ada ada-alkB[ada, alkB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Ada ada-alkB[ada, alkB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Ada aidB[aidB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Ada alkA[alkA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AdiY adiA[adiA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AdiY gadAXW[gadA, gadX] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong AdiY gadBC[gadB, gadC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong AdiY gltBDF[gltB, gltD, gltF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong AgaR agaR[agaR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AgaR agaS-kbaY-agaBCDI[agaB, agaC, agaD, agaI, agaS, kbaY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AgaR kbaZ-agaVWA[agaA, agaV, agaW, kbaZ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AidB aidB[aidB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AlaS alaS[alaS] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AllR allA[allA] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AllR allS[allS] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AllR gcl-hyi-glxR-ybbW-allB-ybbY-glxK[allB, gcl, glxK, glxR, hyi, ybbW, ybbY] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AllS allDCE[allC, allD, allE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak AlpA phoBR[phoB, phoR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AlsR alsRBACE[alsA, alsB, alsC, alsE, alsR] - [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AlsR rpiB[rpiB] - [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AppY appCBXA[appA, appB, appC, appX] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AppY hyaABCDEF[hyaA, hyaB, hyaC, hyaD, hyaE, hyaF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AraC araBAD[araA, araB, araD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AraC araBAD[araA, araB, araD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong AraC araC[araC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AraC araC[araC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong AraC araE-ygeA[araE, ygeA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong AraC araFGH[araF, araG, araH] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Strong AraC araJ[araJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Strong AraC xylAB[xylA, xylB] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AraC ydeNM[ydeM, ydeN] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA aceBAK[aceA, aceB, aceK] - [] [EXP-IMP-REACTION-BLOCKED|W|Reaction blocked in mutant] Weak ArcA ackA-pta[ackA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA acnB[acnB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Weak ArcA aldA[aldA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [,[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArcA appCBXA[appA, appB, appC, appX] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA appY[appY] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak ArcA arcZ[arcZ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA betIBA[betA, betB, betI] - [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA betT[betT] - [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA cadBA[cadA, cadB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA caiTABCDE[caiA, caiB, caiC, caiD, caiE, caiT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA citCDEFXG[citC, citD, citE, citF, citG, citX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak ArcA cydAB[cydA, cydB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA cydDC[cydC, cydD] + [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Weak ArcA cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Weak ArcA dctA[dctA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA dcuB-fumB[fumB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA dcuC[dcuC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA dpiBA[dpiA, dpiB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] Weak ArcA fadBA[fadA, fadB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA fadD-sroD[fadD, sroD] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArcA fadE[fadE] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArcA fadH[fadH] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Weak ArcA fadIJ[fadI, fadJ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA fadL[fadL] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong ArcA fnr[fnr] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA focA-pflB[focA, pflB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArcA fumAC[fumA, fumC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA gadAXW[gadA, gadX] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA gadEF-mdtEF[gadE, gadF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA gatYZABCD[gatA, gatB, gatC, gatD, gatY, gatZ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA glcDEFGBA[glcA, glcB, glcD, glcE, glcF, glcG] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA glpABC[glpA, glpB, glpC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA glpD[glpD] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA gltA[gltA] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Weak ArcA grcA[grcA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA hemA-prfA-prmC[hemA, prfA, prmC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA hyaABCDEF[hyaA, hyaB, hyaC, hyaD, hyaE, hyaF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA hybOABCDEFG[hybA, hybB, hybC, hybD, hybE, hybF, hybG, hybO] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA icd[icd] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArcA iraM[iraM] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak ArcA lldPRD[lldD, lldP, lldR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA mdh[mdh] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA moeAB[moeA, moeB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA ndh[ndh] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA nlpD-rpoS[rpoS] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA nuoABCEFGHIJKLMN[nuoA, nuoB, nuoC, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA ompW[ompW] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA oppABCDF[oppA, oppB, oppC, oppD, oppF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA pdhR-aceEF-lpd[aceE, aceF, lpd] - [,[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArcA ptsG[ptsG] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA puuA-ymjE-puuP[puuA, puuP, ymjE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA puuDRCBE[puuB, puuC, puuD, puuE, puuR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA rhaT[rhaT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA rmf[rmf] - [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA rpsJ-rplCDWB-rpsS-rplV-rpsC-rplP-rpmC-rpsQ[rplB, rplC, rplD, rplP, rplV, rplW, rpmC, rpsC, rpsJ, rpsQ, rpsS] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA rsd[rsd] - [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA rutABCDEFG[rutA, rutB, rutC, rutD, rutE, rutF, rutG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA sdhCDAB-sucABCD-sdhX[sdhA, sdhB, sdhC, sdhD, sdhX, sucA, sucB, sucC, sucD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA sdhCDAB-sucABCD-sdhX[sdhA, sdhB, sdhC, sdhD, sdhX, sucA, sucB, sucC, sucD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA sodA[sodA] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak ArcA ssb[ssb] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA tpx[tpx] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA treBC[treB, treC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA ubiCA[ubiA, ubiC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA uvrA[uvrA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArcA xylFGHR[xylR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA ybdN[ybdN] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak ArcA ydeA[ydeA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArcA ymiC-acnA[acnA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ArgP argO[argO] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong ArgP argP[argP] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Weak ArgP dapB[dapB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong ArgP dnaAN-recF[dnaA, dnaN, recF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong ArgP gdhA[gdhA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArgP lysA[lysA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArgP lysC[lysC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArgP lysP[lysP] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong ArgP map-glnD-dapD[dapD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArgP nrdAB-yfaE[nrdA, nrdB, yfaE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong ArgR argA[argA] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR argCBH[argB, argC, argH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR argD[argD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR argE[argE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR argF[argF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR argG[argG] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArgR argI[argI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR argR[argR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR argT-hisJQMP[hisJ, hisM, hisP, hisQ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR artJ[artJ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR artPIQM[artI, artM, artP, artQ] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR astCADBE[astA, astB, astC, astD, astE] + [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR carAB[carA, carB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR gltBDF[gltB, gltD, gltF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArgR lysO[lysO] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong ArgR metY-rimP-nusA-infB-rbfA-truB-rpsO-pnp[infB, metY, nusA, pnp, rbfA, rimP, rpsO, truB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ArsR arsRBC[arsB, arsC, arsR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AscG ascFB[ascB, ascF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AscG htpG[htpG] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong AscG prpR[prpR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong AscG ybiT[ybiT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong AsnC asnA[asnA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AsnC asnC-mioC-mnmG-rsmG[asnC, mioC, mnmG] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak AtoC atoDAEB[atoA, atoB, atoD, atoE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BaeR acrD[acrD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong BaeR mdtABCD-baeSR[baeR, baeS, mdtA, mdtB, mdtC, mdtD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BaeR spy[spy] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong BasR csgDEFG[csgD, csgE, csgF, csgG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BasR cspI[cspI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong BasR dgkA[dgkA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BasR fimB[fimB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong BasR putA[putA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong BasR qseBC[qseB, qseC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BasR tomB-hha[hha, tomB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong BasR yrbL[yrbL] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BetI betIBA[betA, betB, betI] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BetI betT[betT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BirA bioA[bioA] - [EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong BirA bioBFCD[bioB, bioC, bioD, bioF] - [EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong BluR ycgZ-ymgA-ariR-ymgC[ariR, ycgZ, ymgA, ymgC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BolA ampC[ampC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak BolA ampC[ampC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak BolA csgBAC[csgA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak BolA csgDEFG[csgD, csgE, csgF, csgG] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak BolA dacC[dacC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak BolA dacC[dacC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak BolA mreBCD[mreB, mreC, mreD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BtsR btsT[btsT] + [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong BtsR csgBAC[csgA, csgB, csgC] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak BtsR csgDEFG[csgD, csgE, csgF, csgG] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak BtsR mdh[mdh] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak BtsR pdhR-aceEF-lpd[aceE, aceF, lpd, pdhR] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak BtsR yobF-cspC[cspC, yobF] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP aaeR[aaeR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP aaeXAB[aaeA, aaeB, aaeX] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP aceBAK[aceA, aceB, aceK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP acnB[acnB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP acs-yjcH-actP[acs, actP, yjcH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP aer[aer] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP agp[agp] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP aldA[aldA] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP aldB[aldB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP ampDE[ampD, ampE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ansB[ansB] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP araBAD[araA, araB, araD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP araC[araC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP araE-ygeA[araE, ygeA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP araFGH[araF, araG, araH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP araJ[araJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP araJ[araJ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP argG[argG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ascFB[ascB, ascF] + [COMP-AINF|W|Inferred computationally without human oversight],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP aspA-dcuA[aspA, dcuA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP azuC[azuC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP bglGFB[bglB, bglF, bglG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong CRP bhsA[bhsA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP btsT[btsT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP caiF[caiF] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP caiTABCDE[caiA, caiB, caiC, caiD, caiE, caiT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP cas3[cas3] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP casABCDE12[cas1, cas2, casA, casB, casC, casD, casE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cdd[cdd] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cdd[cdd] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP chbBCARFG[chbA, chbB, chbC, chbF, chbG, chbR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP chiZPQ[chiP, chiQ, chiZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP cirA[cirA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP citCDEFXG[citC, citD, citE, citF, citG, citX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] Weak CRP comR[comR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cpdB[cpdB] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP crp[crp] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP crp[crp] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP csgDEFG[csgD, csgE, csgF, csgG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP csiE[csiE] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP cspD[cspD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cspE[cspE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP csrC[csrC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cstA[cstA] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cyaA[cyaA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cyaR[cyaR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP cytR[cytR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP cytR[cytR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP dadAX[dadA, dadX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong CRP dadAX[dadA, dadX] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP dctA[dctA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP dcuB-fumB[dcuB, fumB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP dcuSR[dcuR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP deoCABD[deoA, deoB, deoC, deoD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP deoCABD[deoA, deoB, deoC, deoD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP dgoRKADT[dgoA, dgoD, dgoK, dgoR, dgoT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP dpiBA[dpiA, dpiB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CRP dsdXA[dsdA, dsdX] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP dusB-fis[dusB, fis] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP dusB-fis[dusB, fis] - [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ebgAC[ebgA, ebgC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP entCEBAH[entA, entB, entC, entE, entH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP epd-pgk-fbaA[epd, fbaA, pgk] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP exuR[exuR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP exuT[exuT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP fadD-sroD[fadD, sroD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP fadH[fadH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP fadL[fadL] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP feaB[feaB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP feaR[feaR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP fecABCDE[fecA, fecB, fecC, fecD, fecE] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP fepA-entD[entD, fepA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP fiu[fiu] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP fixABCX[fixA, fixB, fixC, fixX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP fldA-uof-fur[fur] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP flhDC[flhC, flhD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP focA-pflB[focA, pflB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP frlABCDR[frlA, frlB, frlC, frlD, frlR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP fucAO[fucA, fucO] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak CRP fucPIKUR[fucI, fucK, fucP, fucR, fucU] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP fumAC[fumA, fumC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP fumAC[fumC] ? [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP gadAXW[gadA, gadX] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP gadBC[gadB, gadC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP gadEF-mdtEF[gadE, gadF, mdtE, mdtF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP galETKM[galE, galK, galM, galT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP galETKM[galE, galK, galM, galT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP galP[galP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP galS[galS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP gapA-yeaD[gapA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP gatYZABCD[gatA, gatB, gatC, gatD, gatY, gatZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP gcd[gcd] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP gcvTHP[gcvH, gcvP, gcvT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP gdhA[gdhA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP glaH-lhgD-gabDTP[gabD, gabP, gabT, glaH, lhgD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP glcC[glcC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP glgBXCAP[glgA, glgC, glgP] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP glgS[glgS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP glnALG[glnA, glnG, glnL] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP glnALG[glnA, glnG, glnL] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP glpABC[glpA, glpB, glpC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP glpD[glpD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP glpEGR[glpE, glpG, glpR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP glpFKX[glpF, glpK, glpX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP glpTQ[glpQ, glpT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP gltA[gltA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP gltBDF[gltB, gltD, gltF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP gntP[gntP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong CRP gntRKU[gntK, gntU] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP gntT[gntT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-TAS|W|Traceable author statement to experimental support] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-TAS|W|Traceable author statement to experimental support] Strong CRP grcA[grcA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP grpE[grpE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP guaBA[guaA, guaB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP gyrA[gyrA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP hicAB[hicA, hicB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP hlyE[hlyE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP hofMNOP[hofM, hofN, hofO, hofP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP hpt[hpt] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP hupA[hupA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP hupB[hupB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP hyfABCDEFGHIJR-focB[focB, hyfA, hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP idnDOTR[idnD, idnO, idnR, idnT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP idnK[idnK] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ivbL-ilvBN-uhpABC[ilvB, ilvN, ivbL] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP kbaZ-agaVWA[agaA, agaV, agaW, kbaZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP lacZYA[lacA, lacY, lacZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong CRP lacZYA[lacA, lacY, lacZ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong CRP ldtB[ldtB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ldtB[ldtB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP lgoR[lgoR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP lsrACDBFG-tam[lsrA, lsrB, lsrC, lsrD, lsrF, lsrG, tam] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP lsrRK[lsrK, lsrR] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong CRP malEFGH[malE, malF, malG, malH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Strong CRP malI[malI] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP malI[malI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong CRP malK-lamB-malM[lamB, malK, malM] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Strong CRP malS[malS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP malT[malT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP malXY[malX, malY] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP manA[manA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP manA[manA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP manXYZ[manX, manY, manZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP marRAB[marA, marB, marR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak CRP mcaS[mcaS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP mdh[mdh] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP melAB[melA, melB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP melR[melR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP metK[metK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP metY-rimP-nusA-infB-rbfA-truB-rpsO-pnp[infB, metY, nusA, pnp, rbfA, rimP, rpsO, truB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP mglBAC[mglA, mglB, mglC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP mhpABCDFE[mhpA, mhpB, mhpC, mhpD, mhpE, mhpF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP mhpR-lacI[lacI, mhpR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP mlc-bidA[bidA, mlc] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP mlc-bidA[mlc] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP modABC[modA, modB, modC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP mpl[mpl] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CRP mtlADR[mtlA, mtlD, mtlR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP murQP-yfeW[murP, murQ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong CRP mutY-yggX-mltC-nupG[nupG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP mutY-yggX-mltC-nupG[nupG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP nadC[nadC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP nagBAC-umpH[nagA, nagB, nagC, umpH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP nagBAC-umpH[nagA, nagB, nagC, umpH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP nagE[nagE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP nagE[nagE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP nanATEKQ[nanA, nanE, nanK, nanQ, nanT] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP nanCMS[nanC, nanM, nanS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP narQ[narQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP nirBDC-cysG[cysG, nirB, nirC, nirD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP nlpD-rpoS[rpoS] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP nmpC[nmpC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP nnr-tsaE-amiB-mutL-miaA-hfq-hflXKC[hflC, hflK, hflX, hfq] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP nrdAB-yfaE[nrdA, nrdB, yfaE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP nupC[nupC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ompA[ompA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ompF[ompF] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ompR-envZ[envZ, ompR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP ompR-envZ[envZ, ompR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP ompW[ompW] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP osmY[osmY] - [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP oxyR[oxyR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP paaABCDEFGHIJK[paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP paaZ[paaZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP pck[pck] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP pck[pck] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP pdhR-aceEF-lpd[aceE, aceF, lpd, pdhR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP pdhR-aceEF-lpd[lpd] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP plaR[plaR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP pncB[pncB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ppdD-hofBC[hofB, hofC, ppdD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP ppiA[ppiA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ppiA[ppiA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP preTA[preA, preT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP proP[proP] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP proP[proP] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP prpBCDE[prpB, prpC, prpD, prpE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP prpR[prpR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP psiE[psiE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ptsG[ptsG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ptsHI-crr[crr, ptsH, ptsI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ptsHI-crr[crr, ptsH, ptsI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP putP[putP] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP puuDRCBE[puuB, puuC, puuD, puuE, puuR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP|W|Inferred from expression pattern] Weak CRP raiAZ[raiA, raiZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rbsDACBKR[rbsA, rbsB, rbsC, rbsD, rbsK, rbsR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP relA-mazEFG[mazE, mazF, relA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP rhaBAD[rhaA, rhaB, rhaD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP rhaSR[rhaR, rhaS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rhaT[rhaT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP rmf[rmf] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rplM-rpsI[rplM, rpsI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rpoH[rpoH] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rpoH[rpoH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rpsF-priB-rpsR-rplI[priB, rplI, rpsF, rpsR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rseD-rpoE-rseABC[rpoE, rseA, rseB, rseC, rseD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP rspAB[rspA, rspB] + [COMP-AINF|W|Inferred computationally without human oversight],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong CRP sbmC[sbmC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP sdhCDAB-sucABCD-sdhX[sdhA, sdhB, sdhC, sdhD, sdhX, sucA, sucB, sucC, sucD] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP serA[serA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP serC-aroA[aroA, serC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP sfsA-dksA-gluQ[dksA, sfsA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP sodA[sodA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP sodB[sodB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP sohB[sohB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CRP speC[speC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak CRP spf[spf] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP srlAEBD-gutM-srlR-gutQ[gutM, gutQ, srlA, srlB, srlD, srlE, srlR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP tapT-patZ[patZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP tdcABCDEFG[tdcA, tdcB, tdcC, tdcD, tdcE, tdcF, tdcG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP tnaCAB[tnaA, tnaB, tnaC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP treBC[treB, treC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP treBC[treB, treC] ? [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP trg[trg] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP trxA[trxA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP tsx[tsx] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP tsx[tsx] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ubiG[ubiG] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP udp[udp] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP udp[udp] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP ugpBAECQ[ugpA, ugpB, ugpC, ugpE, ugpQ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CRP uhpT[uhpT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP uidABC[uidA, uidB, uidC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ulaABCDEF[ulaA, ulaB, ulaC, ulaD, ulaE, ulaF] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP uxaB[uxaB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CRP uxaCA[uxaA, uxaC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP uxuAB[uxuA, uxuB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong CRP uxuR[uxuR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP xseA[xseA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP xylAB[xylA, xylB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP xylE[xylE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP xylFGHR[xylF, xylG, xylH, xylR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP yaeP-rof[rof, yaeP] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP yaeQ-arfB-nlpE[arfB, nlpE, yaeQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ybiT[ybiT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ybiT[ybiT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ycdZ[ycdZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Weak CRP ycdZ[ycdZ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ychH[ychH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP yeiP[yeiP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP yeiW[yeiW] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP yhfA[yhfA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP yhfA[yhfA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CRP yhgH-nfuA[nfuA, yhgH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CRP yiaKLMNO-lyxK-sgbHUE[lyxK, sgbE, sgbH, sgbU, yiaK, yiaL, yiaM, yiaN, yiaO] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP yiaKLMNO-lyxK-sgbHUE[lyxK, sgbE, sgbH, sgbU, yiaK, yiaL, yiaM, yiaN, yiaO] ? [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP yibN-grxC-secB-gpsA[gpsA, secB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP yihV-csqR[csqR] + [COMP-HINF-PATTERN-DISCOVERY|W|Manually curated inference based on sequence pattern discovery],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP yihV-csqR[csqR] - [COMP-HINF-PATTERN-DISCOVERY|W|Manually curated inference based on sequence pattern discovery],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP yjhIHG[yjhG, yjhH, yjhI] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ykgR[ykgR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ymiC-acnA[acnA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP ytfK[ytfK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CRP zraSR[zraR, zraS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CRP-Sxy sxy[sxy] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CadC cadBA[cadA, cadB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CadC cadC[cadC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CaiF caiTABCDE[caiA, caiB, caiC, caiD, caiE, caiT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CaiF fixABCX[fixA, fixB, fixC, fixX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cbl ssuEADCB[ssuA, ssuB, ssuC, ssuD, ssuE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cbl tauABCD[tauA, tauB, tauC, tauD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CdaR cdaR[cdaR] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CdaR garD[garD] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CdaR garPLRK-rnpB[garK, garL, garP, garR, rnpB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CdaR gudPXD[gudD, gudP, gudX] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CecR cecR-ybhGFSR[cecR, ybhF, ybhG, ybhR, ybhS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ChbR chbBCARFG[chbA, chbB, chbC, chbF, chbG, chbR] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ChbR chbBCARFG[chbA, chbB, chbC, chbF, chbG, chbR] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ComR bhsA[bhsA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR acrD[acrD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong CpxR aroG[aroG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CpxR bacA[bacA] + [COMP|W|Inferred by computational analysis] [] Weak CpxR bamA-skp-lpxD-fabZ-lpxAB-rnhB-dnaE[fabZ, lpxA, lpxD, skp] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CpxR bamE[bamE] - [COMP|W|Inferred by computational analysis] [] Weak CpxR cpxPQ[cpxP, cpxQ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] Strong CpxR cpxRA[cpxA, cpxR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR csgBAC[csgA, csgB, csgC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong CpxR csgDEFG[csgD, csgE, csgF, csgG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR cyaR[cyaR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR degP[degP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR dgcZ[dgcZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR efeU[efeU] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR ftnB[ftnB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CpxR ldtC[ldtC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CpxR ldtD[ldtD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR marRAB[marA, marB, marR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR mdtABCD-baeSR[baeR, baeS, mdtA, mdtB, mdtC, mdtD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong CpxR motRAB-cheAW[cheA, cheW, motA, motB, motR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR ompC[ompC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR ompF[ompF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR ppiA[ppiA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR ppiD[ppiD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong CpxR psd-mscM[mscM, psd] - [COMP|W|Inferred by computational analysis] [] Weak CpxR rpoH[rpoH] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CpxR rprA[rprA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR rseD-rpoE-rseABC[rpoE, rseA, rseB, rseC, rseD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CpxR sbmA-yaiW[sbmA, yaiW] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CpxR slt[slt] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IGI|W|Inferred from genetic interaction] Strong CpxR spy[spy] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR srkA-dsbA[dsbA, srkA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR tomB-hha[hha, tomB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CpxR tsr[tsr] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CpxR ung[ung] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CpxR xerD-dsbC-recJ-prfB-lysS[dsbC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CpxR yccA[yccA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR yebE[yebE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR yidQ[yidQ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CpxR yqaE-kbp[kbp, yqaE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CpxR yqjA-mzrA[mzrA, yqjA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Cra aceBAK[aceA, aceB, aceK] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra acnB[acnB] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra adhE[adhE] - [COMP-AINF|W|Inferred computationally without human oversight],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra aroP[aroP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-AINF|W|Inferred computationally without human oversight] Weak Cra betIBA[betA, betB, betI] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra betT[betT] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra crp[crp] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra csgDEFG[csgD, csgE, csgF, csgG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra cydAB[cydA, cydB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra edd-eda[eda, edd] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra epd-pgk-fbaA[epd, fbaA, pgk] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra fbaB[fbaB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra fruBKA[fruA, fruB, fruK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[AS-NAS|W|Non-traceable author statement] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[AS-NAS|W|Non-traceable author statement] Weak Cra gapA-yeaD[gapA, yeaD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra glcC[glcC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra glk[glk] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra gpmM-envC-yibQ[envC, gpmM, yibQ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra hcp-hcr-poxB-ltaE-ybjT[poxB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra hydN-hypF[hypF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra icd[icd] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Cra manXYZ[manX, manY, manZ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra marRAB[marA, marB, marR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra mpl[mpl] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra mtlADR[mtlA, mtlD, mtlR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra nirBDC-cysG[cysG, nirB, nirC, nirD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra pck[pck] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra pdeL[pdeL] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra pdhR-aceEF-lpd[aceE, aceF, lpd, pdhR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra pfkA[pfkA] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Cra ppc[ppc] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra ppsA[ppsA] + [COMP-AINF|W|Inferred computationally without human oversight],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra prpBCDE[prpB, prpC, prpD, prpE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra ptsHI-crr[crr, ptsH, ptsI] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra ptsHI-crr[crr, ptsH, ptsI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra pykF[pykF] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong Cra pyrG-eno[eno] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Cra sgrST-setA[setA, sgrS, sgrT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra tpiA[tpiA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra ymiC-acnA[acnA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Cra zwf[zwf] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CreB creABCD[creD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CreB malEFGH[malE, malF, malG, malH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CreB talA-tktB[talA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CsgD csgBAC[csgA, csgB, csgC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsgD csgDEFG[csgD, csgE, csgF, csgG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsgD dgcC[dgcC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsgD flgAMN[flgM, flgN] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CsgD fliAZ-tcyJ[fliA, fliZ, tcyJ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CsgD fliE[fliE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsgD fliFGHIJK[fliF, fliG, fliH, fliI, fliJ, fliK] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsgD iraP[iraP] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CsgD nlpA[nlpA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsgD pepD[pepD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CsgD ubiT-yhbS[ubiT, yhbS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsgD wrbA-yccJ[wrbA, yccJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CsgD yccT[yccT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CspA gyrA[gyrA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CspA hns[hns] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CsqR yihUTS[yihS, yihT, yihU] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CsqR yihV-csqR[csqR, yihV] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CueR copA[copA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CueR cueO[cueO] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CueR moaABCDE[moaA, moaB, moaC, moaD, moaE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CusR cusCFBA[cusA, cusB, cusC, cusF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CusR cusRS[cusR, cusS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CusR cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CusR hiuH[hiuH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CynR cynR[cynR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CynR cynTSX[cynS, cynT, cynX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong CysB cbl[cbl] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CysB cysB[cysB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Weak CysB cysDNC[cysC, cysD, cysN] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak CysB cysJIH[cysH, cysI, cysJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak CysB cysK[cysK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CysB cysPUWAM[cysA, cysM, cysP, cysU, cysW] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CysB dgcZ[dgcZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CysB fliAZ-tcyJ[tcyJ] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CysB hslJ[hslJ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CysB ssuEADCB[ssuA, ssuB, ssuC, ssuD, ssuE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CysB tauABCD[tauA, tauB, tauC, tauD] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CysB tcyP[tcyP] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CysB ybdN[ybdN] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CysB yciW[yciW] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak CysB ygeH[ygeH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CysB yoaC[yoaC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak CytR cdd[cdd] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CytR cytR[cytR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong CytR deoCABD[deoA, deoB, deoC, deoD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CytR mutY-yggX-mltC-nupG[nupG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong CytR nupC[nupC] - [] [AS-TAS|W|Traceable author statement] Weak CytR ppiA[ppiA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong CytR rpoH[rpoH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CytR tsx[tsx] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[IC|W|Inferred by curator],[COMP-HINF|W|Inferred by a human based on computational evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong CytR udp[udp] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong CytR ycdZ[ycdZ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak Dan ttdABT[ttdA, ttdB, ttdT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Dan ttdR[ttdR] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong DcuR aspA-dcuA[aspA, dcuA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DcuR dctA[dctA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DcuR dcuB-fumB[dcuB, fumB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DcuR dpiBA[dpiA, dpiB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong DcuR frdABCD[frdA, frdB, frdC, frdD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DcuR pck[pck] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DeoR deoCABD[deoA, deoB, deoC, deoD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Strong DeoR mutY-yggX-mltC-nupG[nupG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DeoR tsx[tsx] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DgoR dgoRKADT[dgoA, dgoD, dgoK, dgoR, dgoT] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DhaR dhaKLM[dhaK, dhaL, dhaM] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DhaR dhaR[dhaR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DicA dicB-ydfDE-insD7-intQ[dicB, insD7, intQ, ydfD, ydfE] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DicA dicC-ydfXW[dicC, ydfW, ydfX] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DinJ-YafQ cspE[cspE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DinJ-YafQ dinJ-yafQ[dinJ, yafQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong DnaA aldA[aldA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DnaA dnaAN-recF[dnaA, dnaN, recF] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong DnaA dnaAN-recF[dnaA, dnaN, recF] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong DnaA guaBA[guaA, guaB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DnaA nrdAB-yfaE[nrdA, nrdB, yfaE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong DnaA nrdAB-yfaE[nrdA, nrdB, yfaE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak DnaA polA[polA] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DnaA recN[recN] - [COMP|W|Inferred by computational analysis] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DnaA rpoH[rpoH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak DnaA uvrB[uvrB] - [COMP|W|Inferred by computational analysis],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DnaA yjeV[yjeV] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DpiA appY[appY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DpiA citCDEFXG[citC, citD, citE, citF, citG, citX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong DpiA dpiBA[dpiA, dpiB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DpiA exuT[exuT] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DpiA mdh[mdh] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong DsdC dsdC[dsdC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak DsdC dsdXA[dsdA, dsdX] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak EbgR ebgAC[ebgA, ebgC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak EnvR acrAB[acrA, acrB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong EnvY ompC[ompC] + [] [EXP-IMP|W|Inferred from mutant phenotype] Weak EnvY ompF[ompF] + [] [EXP-IMP|W|Inferred from mutant phenotype] Weak EvgA acrD[acrD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak EvgA emrKY[emrK, emrY] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong EvgA evgAS[evgA, evgS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong EvgA gadEF-mdtEF[gadE, gadF, mdtE, mdtF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong EvgA safA-ydeO[safA, ydeO] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong EvgA ydeP[ydeP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong EvgA yegRZ[yegR, yegZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong EvgA yfdX-frc-oxc-yfdVE[frc, oxc, yfdE, yfdV, yfdX] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ExuR exuR[exuR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ExuR exuT[exuT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ExuR lgoR[lgoR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong ExuR uxaB[uxaB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ExuR uxaCA[uxaA, uxaC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ExuR uxuAB[uxuA, uxuB] - [,[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ExuR uxuR[uxuR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ackA-pta[ackA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR acrEF[acrE, acrF] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR adhE[adhE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR aer[aer] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR aldA[aldA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ansB[ansB] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong FNR arcA[arcA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR arcA[arcA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR aspA-dcuA[aspA, dcuA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR aspC[aspC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR aspC[aspC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR bcsABZC[bcsB, bcsZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR cadC[cadC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR caiF[caiF] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR caiTABCDE[caiA, caiB, caiC, caiD, caiE, caiT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ccp[ccp] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong FNR citCDEFXG[citC, citD, citE, citF, citG, citX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] Weak FNR cydAB[cydA, cydB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR cydAB[cydA, cydB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR cydDC[cydC, cydD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR dcuB-fumB[dcuB, fumB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR dcuC[dcuC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR dcuSR[dcuR, dcuS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR dmsABC[dmsA, dmsB, dmsC] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR dpiBA[dpiA, dpiB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak FNR dppABCDF[dppA, dppB, dppC, dppD, dppF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR emrKY[emrK, emrY] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR fdhF[fdhF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR fdnGHI[fdnG, fdnH, fdnI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR fdnGHI[fdnG, fdnH, fdnI] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR feoABC[feoA, feoB, feoC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR fes-ybdZ-entF-fepE[entF, fepE, fes, ybdZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR fixABCX[fixA, fixB, fixC, fixX] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR fnr[fnr] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR fnrS[fnrS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR focA-pflB[focA, pflB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR frdABCD[frdA, frdB, frdC, frdD] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR fumAC[fumA, fumC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR gadAXW[gadA, gadW, gadX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR garPLRK-rnpB[garK, garL, garP, garR, rnpB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR gcvTHP[gcvH, gcvP, gcvT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR gdhA[gdhA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR glnK-amtB[amtB, glnK] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR glnK-amtB[amtB, glnK] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR glpABC[glpA, glpB, glpC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR glpTQ[glpQ, glpT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR gltBDF[gltB, gltD, gltF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR gnd[gnd] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR grcA[grcA] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR grcA[grcA] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR hcp-hcr-poxB-ltaE-ybjT[hcp, hcr, poxB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR hemA-prfA-prmC[hemA, prfA, prmC] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR hlyE[hlyE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR hmp[hmp] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR hyfABCDEFGHIJR-focB[focB, hyfA, hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR hypABCDE-fhlA[fhlA, hypB, hypC, hypD, hypE] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR iraM[iraM] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak FNR katG[katG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Weak FNR malPQ[malP, malQ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR map-glnD-dapD[glnD] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR map-glnD-dapD[glnD] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR moaABCDE[moaA, moaB, moaC, moaD, moaE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR moeAB[moeA, moeB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR nac[nac] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR napFDAGHBC-ccmABCDEFGH[ccmA, ccmB, ccmC, ccmD, ccmE, ccmF, ccmG, ccmH, napA, napB, napC, napD, napF, napG, napH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR narGHJI[narG, narH, narI, narJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR narKS[narK, narS] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong FNR narXL[narL, narX] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Strong FNR ndh[ndh] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR nfeR[nfeR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR nikABCDER[nikA, nikB, nikC, nikD, nikE, nikR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR nirBDC-cysG[cysG, nirB, nirC, nirD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR norVW[norV, norW] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR nrdDG[nrdD, nrdG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR nuoABCEFGHIJKLMN[nuoA, nuoB, nuoC, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR ompW[ompW] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR ompW[ompW] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR pdeF[pdeF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR pdhR-aceEF-lpd[aceE, aceF, lpd, pdhR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR pdhR-aceEF-lpd[aceE, aceF, lpd, pdhR] - [,[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR pepT[pepT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR pitA[pitA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR pstSCAB-phoU[phoU, pstA, pstB, pstC, pstS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR purMN[purM, purN] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR puuA-ymjE-puuP[puuA, puuP, ymjE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ravA-viaA[ravA, viaA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR rplM-rpsI[rplM, rpsI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR rpsJ-rplCDWB-rpsS-rplV-rpsC-rplP-rpmC-rpsQ[rplB, rplC, rplD, rplP, rplV, rplW, rpmC, rpsC, rpsJ, rpsQ, rpsS] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR rpsP-rimM-trmD-rplS[rimM, rplS, rpsP, trmD] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR sdhCDAB-sucABCD-sdhX[sdhA, sdhB, sdhC, sdhD, sdhX, sucA, sucB, sucC, sucD] - [,[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR sodA[sodA] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR soxR[soxR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR soxS[soxS] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ssuEADCB[ssuA, ssuB, ssuC, ssuD, ssuE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR tar-tap-cheRBYZ[cheB, cheR, cheY, cheZ, tap, tar] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR tdcABCDEFG[tdcA, tdcB, tdcC, tdcD, tdcE, tdcF, tdcG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR thrS-infC-rpmI-rplT-pheMST-ihfA[pheM, rplT] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR tpx[tpx] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ubiCA[ubiA, ubiC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR upp-uraA[upp, uraA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR uxaCA[uxaA, uxaC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR xdhABC[xdhA, xdhB, xdhC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ybdN[ybdN] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak FNR ychO[ychO] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ydeJ[ydeJ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak FNR ydhYVWXUT[ydhT, ydhU, ydhV, ydhW, ydhX, ydhY] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR yecR[yecR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR yeiL[yeiL] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ygbA[ygbA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR yliM-ompX[ompX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ymiC-acnA[acnA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ynfEFGH-dmsD[dmsD, ynfE, ynfF, ynfG, ynfH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FNR ysgA[ysgA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ytfE[ytfE] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR ytiCD-idlP-iraD[idlP, iraD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FNR zwf[zwf] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FabR fabA[fabA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FabR fabB[fabB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR accA[accA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR accBC[accB, accC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR accD[accD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR fabA[fabA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FadR fabB[fabB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR fabI[fabI] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR fadBA[fadA, fadB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak FadR fadD-sroD[fadD, sroD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong FadR fadE[fadE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR fadH[fadH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR fadIJ[fadI, fadJ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR fadL[fadL] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong FadR fadM[fadM] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Weak FadR fadR[fadR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak FadR iclR[iclR] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR uspA[uspA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FadR yceD-rpmF-plsX-fabHDG-acpP-fabF[fabD, fabG, fabH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FeaR feaB[feaB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FeaR tynA[tynA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FhlA fdhF[fdhF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FhlA hycABCDEFGHI[hycA, hycB, hycC, hycD, hycE, hycF, hycG, hycH, hycI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FhlA hydN-hypF[hydN, hypF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FhlA hyfABCDEFGHIJR-focB[focB, hyfA, hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FhlA hypABCDE-fhlA[fhlA, hypA, hypB, hypC, hypD, hypE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis abgABT-ogt[ogt] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fis acnB[acnB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis acs-yjcH-actP[acs, actP, yjcH] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis adhE[adhE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis alaWX[alaW, alaX] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis aldB[aldB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis ansB[ansB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis argU[argU] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fis argW[argW] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis argX-hisR-leuT-proM[argX, hisR, leuT, proM] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis aspV[aspV] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis bdm-sra[sra] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis bglGFB[bglB, bglF, bglG] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fis carAB[carA, carB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis cbpAM[cbpA, cbpM] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong Fis crp[crp] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis cspA[cspA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong Fis cspI[cspI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis dcuB-fumB[fumB] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis deoCABD[deoA, deoB, deoC, deoD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis dmsABC[dmsA, dmsB, dmsC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis dnaAN-recF[dnaA, dnaN, recF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis dps[dps] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis dusB-fis[dusB, fis] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis emrD[emrD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis fadBA[fadA, fadB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis flxA[flxA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis focA-pflB[pflB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis gadAXW[gadA, gadX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis gadBC[gadB, gadC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis garPLRK-rnpB[rnpB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis garPLRK-rnpB[rnpB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis glcC[glcC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis glnALG[glnA, glnG, glnL] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis glnHPQ[glnQ] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis glpABC[glpA, glpB, glpC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis glpTQ[glpQ, glpT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis gltX[gltX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Strong Fis glyU[glyU] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis grcA[grcA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis guaBA[guaA, guaB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong Fis gyrA[gyrA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis gyrB[gyrB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis hlyE[hlyE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis hns[hns] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Strong Fis hupA[hupA] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis hupB[hupB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis hyaABCDEF[hyaA, hyaB, hyaC, hyaD, hyaE, hyaF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis katE[katE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis leuQPV[leuP, leuQ, leuV] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis leuX[leuX] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis lptD-surA-pdxA-rsmA-apaGH[apaG, apaH, pdxA, rsmA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis lysT-valT-lysW[lysT, lysW, valT] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [] Weak Fis malEFGH[malE, malF, malG, malH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis marRAB[marA, marB, marR] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis metT-leuW-glnUW-metU-glnVX[glnU, glnV, glnW, glnX, leuW, metT, metU] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fis metY-rimP-nusA-infB-rbfA-truB-rpsO-pnp[infB, metY, nusA, pnp, rbfA, rimP, rpsO, truB] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis mglBAC[mglA, mglC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis msrA[msrA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis mtlADR[mtlA, mtlD, mtlR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis nanATEKQ[nanA, nanE, nanK, nanQ, nanT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis narGHJI[narG, narH, narI, narJ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis narKS[narK, narS] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis ndh[ndh] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Strong Fis ndh[ndh] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong Fis nirBDC-cysG[cysG, nirB, nirC, nirD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis nrdAB-yfaE[nrdA, nrdB, yfaE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis nuoABCEFGHIJKLMN[nuoA, nuoB, nuoC, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis osmE[osmE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fis osmY[osmY] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis patA[patA] ? [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fis pdhR-aceEF-lpd[lpd] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fis pheU[pheU] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fis pheV[pheV] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis proK[proK] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis proL[proL] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis proP[proP] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong Fis ptsG[ptsG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis ptsG[ptsG] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis pyrD[pyrD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis queA[queA] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis relA-mazEFG[mazE, mazF, mazG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis rplM-rpsI[rplM, rpsI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak Fis rrsA-ileT-alaT-rrlA-rrfA[alaT, ileT, rrfA, rrlA, rrsA] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong Fis rrsB-gltT-rrlB-rrfB[gltT, rrfB, rrlB, rrsB] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis rrsC-gltU-rrlC-rrfC[gltU, rrfC, rrlC, rrsC] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF[alaU, ileU, rrfD, rrfF, rrlD, rrsD, thrV] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis rrsE-gltV-rrlE-rrfE[gltV, rrfE, rrlE, rrsE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis rrsG-gltW-rrlG-rrfG[gltW, rrfG, rrlG, rrsG] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis rrsH-ileV-alaV-rrlH-rrfH[alaV, ileV, rrfH, rrlH, rrsH] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis serT[serT] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fis serX[serX] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis ssrS-fau[fau, ssrS] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis ssrS-fau[fau, ssrS] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis thrU-tyrU-glyT-thrT-tufB[glyT, thrT, thrU, tufB, tyrU] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis thrW[thrW] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak Fis topA[topA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis topA[topA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis trg[trg] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis trmA[trmA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fis tyrTV-tpr[tpr, tyrT, tyrV] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fis valUXY-lysV[lysV, valU, valX, valY] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] Strong Fis xylFGHR[xylF, xylG, xylH, xylR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fis yeaR-yoaG[yeaR, yoaG] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong FlhDC flgAMN[flgA, flgM, flgN] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC flgBCDEFGHIJ[flgB, flgC, flgD, flgE, flgF, flgG, flgH, flgI, flgJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FlhDC flhBAE[flhA, flhB, flhE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FlhDC fliAZ-tcyJ[fliA, fliZ, tcyJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FlhDC fliDST[fliD, fliS, fliT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak FlhDC fliE[fliE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC fliFGHIJK[fliF, fliG, fliH, fliI, fliJ, fliK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC fliLMNOPQR[fliL, fliM, fliN, fliO, fliP, fliQ, fliR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FlhDC glpABC[glpA, glpB, glpC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC gltI-sroC-gltJKL[gltI, gltJ, gltK, gltL, sroC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FlhDC hydN-hypF[hydN, hypF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC mdh[mdh] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC mglBAC[mglA, mglB, mglC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC napFDAGHBC-ccmABCDEFGH[ccmA, ccmB, ccmC, ccmD, ccmE, ccmF, ccmG, ccmH, napA, napB, napC, napD, napF, napG, napH] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC pdeH[pdeH] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC ppdAB-ygdB-ppdC-recC[ppdA, ppdB, ppdC, recC, ygdB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC ycgR[ycgR] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FlhDC yecR[yecR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FlhDC ygbJK[ygbK] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FliZ csgBAC[csgA, csgB, csgC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak FliZ csgDEFG[csgD, csgE, csgF, csgG] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FliZ flhDC[flhC, flhD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FliZ gadBC[gadB, gadC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FliZ gadEF-mdtEF[gadE, gadF, mdtE, mdtF] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FliZ hdeAB-yhiD[hdeA, hdeB, yhiD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FliZ mlrA[mlrA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FliZ osmY[osmY] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FliZ pdeR[pdeR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FrlR frlABCDR[frlA, frlB, frlC, frlD, frlR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong FucR fucAO[fucA, fucO] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak FucR fucPIKUR[fucI, fucK, fucP, fucR, fucU] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur aspC[aspC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur cirA[cirA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong Fur cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur dcuB-fumB[fumB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur entCEBAH[entA, entB, entC, entE, entH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur entS[entS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong Fur entS[entS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong Fur esrE[esrE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur exbBD[exbB, exbD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fur fecABCDE[fecA, fecB, fecC, fecD, fecE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur fecIR[fecI, fecR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong Fur feoABC[feoA, feoB, feoC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur fepA-entD[entD, fepA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur fepB[fepB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong Fur fepDGC[fepC, fepD, fepG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong Fur fes-ybdZ-entF-fepE[entF, fepE, fes, ybdZ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong Fur fhuACDB[fhuA, fhuB, fhuC, fhuD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur fhuE[fhuE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak Fur fhuF[fhuF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur fiu[fiu] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fur fldA-uof-fur[fur] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fur flhDC[flhC, flhD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak Fur fnr[fnr] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur ftnA[ftnA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur fumAC[fumC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur garPLRK-rnpB[garK, garL, garP, garR, rnpB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fur gdhA[gdhA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur gdhA[gdhA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur glnK-amtB[amtB, glnK] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur glnK-amtB[amtB, glnK] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur gltBDF[gltB, gltD, gltF] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur gnd[gnd] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur gpmA[gpmA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur grcA[grcA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur gspCDEFGHIJKLMO[gspC, gspD, gspE, gspF, gspG, gspH, gspI, gspJ, gspK, gspL, gspM, gspO] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fur hmp[hmp] - [AS|W|Author statement],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [AS|W|Author statement],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak Fur katE[katE] + [] [EXP-IEP|W|Inferred from expression pattern] Weak Fur katG[katG] + [] [EXP-IEP|W|Inferred from expression pattern] Weak Fur map-glnD-dapD[glnD] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur metH[metH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak Fur metJ[metJ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fur mntH[mntH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IGI|W|Inferred from genetic interaction] Weak Fur mntP[mntP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Fur nac[nac] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur ndh[ndh] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur nfeF[nfeF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur nlpD-rpoS[rpoS] - [] [EXP-IEP|W|Inferred from expression pattern],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur nohA-stfQ-tfaQ[nohA, stfQ, tfaQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur nrdHIEF[nrdE, nrdF, nrdH, nrdI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur ompF[ompF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur ompW[ompW] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur oppABCDF[oppA, oppB, oppC, oppD, oppF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fur pdhR-aceEF-lpd[lpd] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur pdhR-aceEF-lpd[lpd] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur purR[purR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak Fur pyrC[pyrC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur rcnAB[rcnA, rcnB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur ryhB[ryhB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong Fur sdhCDAB-sucABCD-sdhX[sdhA, sdhB, sdhC, sdhD, sdhX, sucA, sucB, sucC, sucD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur sodA[sodA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur soxR[soxR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur soxS[soxS] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur sufABCDSE[sufA, sufB, sufC, sufD, sufE, sufS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur tonB[tonB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fur tonB[tonB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Fur ygaC[ygaC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur yhhY[yhhY] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur yjjZ[yjjZ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Fur zinT[zinT] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Fur zwf[zwf] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadE bamA-skp-lpxD-fabZ-lpxAB-rnhB-dnaE[fabZ, lpxA, lpxD, skp] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadE cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadE fliCX[fliC, fliX] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadE gadAXW[gadW, gadX] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadE gadBC[gadB, gadC] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GadE gadEF-mdtEF[gadE, gadF, mdtE, mdtF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadE gltBDF[gltB, gltD, gltF] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GadE gnd[gnd] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadE hdeAB-yhiD[hdeA, hdeB, yhiD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GadE hdeD[hdeD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GadE lrp[lrp] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadE purA[purA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadE rcsA[rcsA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadE yhiM[yhiM] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak GadE yjbQR[yjbQ, yjbR] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak GadE-RcsB adiC[adiC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong GadE-RcsB aslB[aslB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong GadE-RcsB cadBA[cadA, cadB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadE-RcsB gadAXW[gadA, gadX] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GadE-RcsB slp-dctR[dctR, slp] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadE-RcsB yhiM[yhiM] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong GadW gadAXW[gadA, gadX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadW gadAXW[gadA, gadW, gadX] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadW gadBC[gadB, gadC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadW gadBC[gadB, gadC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadW gadEF-mdtEF[gadE, gadF, mdtE, mdtF] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadW gadY[gadY] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadW hdeAB-yhiD[hdeA, hdeB, yhiD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadW hdeAB-yhiD[hdeA, hdeB, yhiD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadW slp-dctR[dctR, slp] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX asnB[asnB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX btuB-murI[btuB, murI] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadX cadBA[cadA, cadB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX clpPX-lon[lon] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX dtpA[dtpA] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak GadX gadAXW[gadA, gadW, gadX] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadX gadAXW[gadW] - [,[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak GadX gadBC[gadB, gadC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GadX gadEF-mdtEF[gadE, gadF, mdtE, mdtF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] Strong GadX gadY[gadY] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX glnK-amtB[amtB, glnK] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX glsA-ybaT[glsA, ybaT] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak GadX hdeAB-yhiD[hdeA, hdeB, yhiD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadX hdeAB-yhiD[hdeA, hdeB, yhiD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GadX hdeD[hdeD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] Strong GadX hns[hns] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX nlpD-rpoS[rpoS] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX slp-dctR[dctR, slp] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GadX uspE[uspE] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GadX ydeNM[ydeM, ydeN] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak GadX ynfB-speG[speG, ynfB] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak GalR galETKM[galE, galK, galM, galT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GalR galETKM[galE, galK, galM, galT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GalR galP[galP] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GalR galR[galR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GalR galS[galS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GalR mglBAC[mglA, mglB, mglC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GalS galETKM[galE, galK, galM, galT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GalS galETKM[galE, galK, galM, galT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GalS galP[galP] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong GalS galR[galR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GalS galS[galS] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GalS mglBAC[mglA, mglB, mglC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GatR gatYZABCD[gatA, gatB, gatC, gatD, gatY, gatZ] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GcvA gcvA[gcvA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong GcvA gcvB[gcvB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong GcvA gcvTHP[gcvH, gcvP, gcvT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GcvA gcvTHP[gcvH, gcvP, gcvT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong GlaR glaH-lhgD-gabDTP[gabD, gabP, gabT, glaH, lhgD] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP|W|Inferred from expression pattern],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong GlcC glcC[glcC] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GlcC glcDEFGBA[glcA, glcB, glcD, glcE, glcF, glcG] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GlpR glpABC[glpA, glpB, glpC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong GlpR glpD[glpD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GlpR glpFKX[glpF, glpK, glpX] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong GlpR glpTQ[glpQ, glpT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GlrR glmY[glmY] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GlrR rseD-rpoE-rseABC[rpoE, rseA, rseB, rseC, rseD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GntR edd-eda[eda, edd] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Strong GntR gntRKU[gntK, gntU] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong GntR gntT[gntT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-TAS|W|Traceable author statement to experimental support] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-TAS|W|Traceable author statement to experimental support] Strong GntR idnDOTR[idnD, idnO, idnR, idnT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GntR idnK[idnK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak GntR yhgH-nfuA[nfuA, yhgH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak GutM srlAEBD-gutM-srlR-gutQ[gutM, gutQ, srlA, srlB, srlD, srlE, srlR] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS acrEF[acrE, acrF] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS adeD[adeD] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS adiA[adiA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS adiY[adiY] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS appY[appY] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS argT-hisJQMP[hisJ, hisM, hisP, hisQ] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS asr[asr] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak H-NS bglGFB[bglB, bglF, bglG] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS bolA[bolA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS cadBA[cadA, cadB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS cadC[cadC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS caiF[caiF] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS caiTABCDE[caiA, caiB, caiC, caiD, caiE, caiT] - [] [EXP-IMP|W|Inferred from mutant phenotype] Weak H-NS casABCDE12[cas1, cas2, casA, casB, casC, casD, casE] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS chiA[chiA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS cmoM-mukFEB[cmoM, mukB, mukE, mukF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS csgDEFG[csgD, csgE, csgF, csgG] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS csiE[csiE] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS cspA[cspA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS cspD[cspD] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS cydAB[cydA, cydB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS cysPUWAM[cysA, cysM, cysP, cysU, cysW] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS degP[degP] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS dps[dps] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS evgAS[evgA, evgS] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS fes-ybdZ-entF-fepE[entF, fepE, fes, ybdZ] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS fimAICDFGH[fimA, fimC, fimD, fimF, fimG, fimH, fimI] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS fimB[fimB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS fimE[fimE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS flhDC[flhC, flhD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS fliAZ-tcyJ[fliA, fliZ, tcyJ] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Weak H-NS fliCX[fliC, fliX] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS ftnA[ftnA] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS gadAXW[gadA, gadW, gadX] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong H-NS gadEF-mdtEF[gadE, gadF, mdtE, mdtF] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS galETKM[galE, galK, galM, galT] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS garPLRK-rnpB[garK, garL, garP, garR, rnpB] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS glaH-lhgD-gabDTP[gabD, gabP, gabT, glaH, lhgD] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS gspAB[gspA, gspB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS gspCDEFGHIJKLMO[gspC, gspD, gspE, gspF, gspG, gspH, gspI, gspJ, gspK, gspL, gspM, gspO] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS hchA[hchA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS hdeAB-yhiD[hdeA, hdeB, yhiD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS hdeD[hdeD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS hdfR[hdfR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS hlyE[hlyE] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS hlyE[hlyE] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS hns[hns] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS ilvIH[ilvH, ilvI] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS lacZYA[lacA, lacY, lacZ] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS leuO[leuO] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong H-NS lrp[lrp] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS malEFGH[malE, malF, malG, malH] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS mdtUJI[mdtI, mdtJ, mdtU] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS micF[micF] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS nhaAR[nhaA, nhaR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS nirBDC-cysG[cysG, nirB, nirC, nirD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS nrdAB-yfaE[nrdA, nrdB, yfaE] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS nrdDG[nrdD, nrdG] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS osmC[osmC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS proVWX[proV, proW, proX] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS rcsA[rcsA] - [COMP-AINF|W|Inferred computationally without human oversight] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS rcsDB[rcsB, rcsD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS relA-mazEFG[mazE, mazF, relA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS rrsB-gltT-rrlB-rrfB[gltT, rrfB, rrlB, rrsB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS rrsC-gltU-rrlC-rrfC[gltU, rrfC, rrlC, rrsC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF[alaU, ileU, rrfD, rrfF, rrlD, rrsD, thrV] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS rrsG-gltW-rrlG-rrfG[gltW, rrfG, rrlG, rrsG] - [] [AS-TAS|W|Traceable author statement],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS rrsH-ileV-alaV-rrlH-rrfH[alaV, ileV, rrfH, rrlH, rrsH] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS safA-ydeO[ydeO] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS slp-dctR[dctR, slp] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS srlAEBD-gutM-srlR-gutQ[gutM, gutQ, srlA, srlB, srlD, srlE, srlR] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak H-NS ssrS-fau[fau, ssrS] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS stpA[stpA] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS yciGFE[yciE, yciF, yciG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong H-NS ydeP[ydeP] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS yhiM[yhiM] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong H-NS yjjP[yjjP] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong H-NS yjjQ-bglJ[bglJ, yjjQ] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong HU galETKM[galE, galK, galM, galT] - [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HU micF[micF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HU mtr[mtr] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HU seqA-pgm[pgm, seqA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HU tyrP[tyrP] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HcaR hcaEFCBD[hcaB, hcaC, hcaD, hcaE, hcaF] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HcaR hcaR[hcaR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HdfR flhDC[flhC, flhD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HdfR gltBDF[gltB, gltD, gltF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong HicB hicAB[hicA, hicB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HigA higBA[higA, higB] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong HigB-HigA higBA[higA, higB] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong HipAB hipBA[hipA, hipB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HipAB relA-mazEFG[mazE, mazF, relA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HipB fadH[fadH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HipB hipBA[hipA, hipB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HipB relA-mazEFG[mazE, mazF, relA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HprR cusCFBA[cusA, cusB, cusC, cusF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] Strong HprR cusRS[cusR, cusS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong HprR cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HprR hiuH[hiuH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HyfR hyfABCDEFGHIJR-focB[focB, hyfA, hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HypT cydAB[cydA, cydB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong HypT cysJIH[cysH] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HypT fecABCDE[fecA, fecB, fecC, fecD, fecE] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HypT metBL[metB, metL] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak HypT metNIQ[metI, metN, metQ] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF aceBAK[aceA, aceB, aceK] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF acs-yjcH-actP[acs, actP, yjcH] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF adiA[adiA] + [EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF amiA-hemF[amiA, hemF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak IHF atoDAEB[atoA, atoB, atoD, atoE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF bdm-sra[sra] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF carAB[carA, carB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF carAB[carA, carB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF cmk-rpsA-ihfB[ihfB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF csgDEFG[csgD, csgE, csgF, csgG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF csrB[csrB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF cysJIH[cysH, cysI, cysJ] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF dcuD[dcuD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak IHF dmsABC[dmsA, dmsB, dmsC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF dppABCDF[dppA, dppB, dppC, dppD, dppF] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak IHF dps[dps] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak IHF dusB-fis[dusB, fis] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF fimAICDFGH[fimA, fimC, fimD, fimF, fimG, fimH, fimI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF fimB[fimB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong IHF flhDC[flhC, flhD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak IHF fliAZ-tcyJ[fliA, fliZ, tcyJ] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF fnr[fnr] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF focA-pflB[focA, pflB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF folA[folA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF gcd[gcd] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF glcDEFGBA[glcA, glcB, glcD, glcE, glcF, glcG] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF glmY[glmY] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF glnHPQ[glnH, glnP, glnQ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-PCR-MANUAL|W|ChIP-PCR evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong IHF glpTQ[glpQ, glpT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF gltA[gltA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF gltBDF[gltB, gltD, gltF] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF hemA-prfA-prmC[hemA, prfA, prmC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF hipBA[hipA, hipB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak IHF hpt[hpt] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF hycABCDEFGHI[hycA, hycB, hycC, hycD, hycE, hycF, hycG, hycH, hycI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF hypABCDE-fhlA[fhlA, hypA, hypB, hypC, hypD, hypE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF ibpAB[ibpB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak IHF ilvLXGMEDA[ilvA, ilvD, ilvE, ilvG, ilvL, ilvM, ilvX] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-PCR-MANUAL|W|ChIP-PCR evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF ilvLXGMEDA[ilvA, ilvD, ilvE, ilvG, ilvL, ilvM, ilvX] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-PCR-MANUAL|W|ChIP-PCR evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF micF[micF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF mtr[mtr] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF narGHJI[narG, narH, narI, narJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF narKS[narK, narS] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF ndh[ndh] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF nirBDC-cysG[cysG, nirB, nirC, nirD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF nirBDC-cysG[cysG, nirB, nirC, nirD] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF nmpC[nmpC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong IHF norVW[norV, norW] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong IHF norVW[norV, norW] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong IHF nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF nuoABCEFGHIJKLMN[nuoA, nuoB, nuoC, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF ompC[ompC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF ompF[ompF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak IHF ompF[ompF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak IHF ompR-envZ[envZ, ompR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong IHF osmE[osmE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF osmY[osmY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-PCR-MANUAL|W|ChIP-PCR evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF paaABCDEFGHIJK[paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF paaZ[paaZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF patA[patA] ? [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak IHF plaR[plaR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong IHF proVWX[proV, proW, proX] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF pspABCDE[pspA, pspB, pspC, pspD, pspE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF pspGH[pspG, pspH] + [COMP|W|Inferred by computational analysis] [] Weak IHF pstSCAB-phoU[phoU, pstA, pstB, pstC, pstS] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF rpoH[rpoH] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF rseD-rpoE-rseABC[rpoE, rseA, rseB, rseC, rseD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Weak IHF rtcBA[rtcA, rtcB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak IHF sdhCDAB-sucABCD-sdhX[sdhX, sucA, sucB, sucC, sucD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF sodA[sodA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong IHF sodB[sodB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF ssuEADCB[ssuA, ssuB, ssuC, ssuD, ssuE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF ssuEADCB[ssuA, ssuB, ssuC, ssuD, ssuE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF sufABCDSE[sufA, sufB, sufC, sufD, sufE, sufS] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong IHF tdcABCDEFG[tdcA, tdcB, tdcC, tdcD, tdcE, tdcF, tdcG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong IHF thrS-infC-rpmI-rplT-pheMST-ihfA[ihfA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong IHF tyrP[tyrP] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF ubiCA[ubiA, ubiC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF ulaABCDEF[ulaA, ulaB, ulaC, ulaD, ulaE, ulaF] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [AS-NAS|W|Non-traceable author statement] Weak IHF ulaG[ulaG] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF uspA[uspA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF uspB[uspB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF yadV-htrE[htrE, yadV] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF yeiL[yeiL] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IHF yiaKLMNO-lyxK-sgbHUE[lyxK, sgbE, sgbH, sgbU, yiaK, yiaL, yiaM, yiaN, yiaO] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IHF yjbEFGH[yjbE, yjbF, yjbG, yjbH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong IclR aceBAK[aceA, aceB, aceK] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IclR iclR[iclR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IdnR gntRKU[gntK, gntU] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IdnR idnDOTR[idnD, idnO, idnR, idnT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IdnR idnK[idnK] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IlvY ilvC[ilvC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong IlvY ilvY[ilvY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong IscR erpA[erpA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IscR hyaABCDEF[hyaA, hyaB, hyaC, hyaD, hyaE, hyaF] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IscR iscRSUA[iscA, iscR, iscS, iscU] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IscR napFDAGHBC-ccmABCDEFGH[napA, napB, napC, napD, napF, napG, napH] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IscR nrdHIEF[nrdE, nrdF, nrdH, nrdI] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak IscR rnlAB[rnlA, rnlB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IscR selO[selO] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong IscR sufABCDSE[sufA, sufB, sufC, sufD, sufE, sufS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Strong IscR yhgH-nfuA[nfuA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong KdgR edd-eda[eda, edd] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong KdpE kdpFABC[kdpA, kdpB, kdpC, kdpF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LacI lacZYA[lacA, lacY, lacZ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LeuO bglGFB[bglB, bglF, bglG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong LeuO cadC[cadC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LeuO casABCDE12[cas1, cas2, casA, casB, casC, casD, casE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong LeuO dsrA[dsrA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LeuO leuLABCD[leuA, leuB, leuC, leuD, leuL] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LeuO leuO[leuO] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong LeuO leuO[leuO] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong LeuO yjjQ-bglJ[bglJ, yjjQ] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong LexA cho[cho] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak LexA dinB-yafNOP[dinB, yafN, yafO, yafP] - [COMP-AINF|W|Inferred computationally without human oversight],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Weak LexA dinD[dinD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA dinG-ybiB[dinG, ybiB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LexA dinI[dinI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LexA dinJ-yafQ[dinJ, yafQ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA dinQ[dinQ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Weak LexA ftsK[ftsK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LexA hokE[hokE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak LexA insK[insK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA lexA-dinF[dinF, lexA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LexA mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC[ddlB, ftsA, ftsI, ftsL, ftsQ, ftsW, ftsZ, lpxC, mraY, murC, murD, murE, murF, murG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak LexA polB[polB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LexA ptrA-recBD[ptrA, recB, recD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong LexA recAX[recA, recX] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong LexA recN[recN] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LexA recQ[recQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA rpsU-dnaG-rpoD[dnaG, rpoD, rpsU] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong LexA ruvAB[ruvA, ruvB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong LexA sbmC[sbmC] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA ssb[ssb] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak LexA sulA[sulA] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak LexA symE[symE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong LexA tisB[tisB] - [COMP|W|Inferred by computational analysis],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA umuDC[umuC, umuD] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Strong LexA uvrA[uvrA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak LexA uvrB[uvrB] - [COMP|W|Inferred by computational analysis],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong LexA uvrD[uvrD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak LexA uvrYC[uvrC, uvrY] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA ybfE[ybfE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak LexA ybgA-phr[phr] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA ydjM[ydjM] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LexA yebG[yebG] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LexA yehF[yehF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak LldR lldPRD[lldD, lldP, lldR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LldR lldPRD[lldD, lldP, lldR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LrhA fimE[fimE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LrhA flhDC[flhC, flhD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LrhA leuO[leuO] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LrhA lrhA[lrhA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp adhE[adhE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp aidB[aidB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Lrp alaA-yfbR[alaA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp alaE[alaE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp argO[argO] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp avtA[avtA] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Lrp cadBA[cadA, cadB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp dadAX[dadA, dadX] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong Lrp fimAICDFGH[fimA, fimC, fimD, fimF, fimG, fimH, fimI] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong Lrp fimE[fimE] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp gcvTHP[gcvH, gcvP, gcvT] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp glaH-lhgD-gabDTP[gabD, gabP, gabT, glaH, lhgD] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp gltBDF[gltB, gltD, gltF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp hdeAB-yhiD[hdeA, hdeB, yhiD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp ilvIH[ilvH, ilvI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong Lrp ilvIH[ilvH, ilvI] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong Lrp ilvLXGMEDA[ilvA, ilvD, ilvE, ilvG, ilvL, ilvM, ilvX] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp kbl-tdh[kbl, tdh] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp leuE[leuE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Lrp livJ[livJ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp livKHMGF[livF, livG, livH, livK, livM] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Lrp lrp[lrp] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp lysP[lysP] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp lysU[lysU] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp malT[malT] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp micF[micF] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp ompC[ompC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp oppABCDF[oppA, oppB, oppC, oppD, oppF] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp osmC[osmC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp osmC[osmC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp osmY[osmY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp ridA[ridA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp rrsA-ileT-alaT-rrlA-rrfA[alaT, ileT, rrfA, rrlA, rrsA] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Lrp rrsB-gltT-rrlB-rrfB[gltT, rrfB, rrlB, rrsB] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP|W|Inferred from expression pattern],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp rrsC-gltU-rrlC-rrfC[gltU, rrfC, rrlC, rrsC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IDA|W|Inferred from direct assay] Strong Lrp rrsD-ileU-alaU-rrlD-rrfD-thrV-rrfF[alaU, ileU, rrfD, rrfF, rrlD, rrsD, thrV] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp rrsE-gltV-rrlE-rrfE[gltV, rrfE, rrlE, rrsE] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp rrsG-gltW-rrlG-rrfG[gltW, rrfG, rrlG, rrsG] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp rrsH-ileV-alaV-rrlH-rrfH[alaV, ileV, rrfH, rrlH, rrsH] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp sdaA[sdaA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Lrp serA[serA] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp serA[serA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp serC-aroA[aroA, serC] + [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-CHIP|W|high throughput ChIP-chip evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp ssrS-fau[fau, ssrS] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Lrp stpA[stpA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Lrp yeiL[yeiL] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Lrp yojI[yojI] + [COMP-AINF|W|Inferred computationally without human oversight] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LsrR lsrACDBFG-tam[lsrA, lsrB, lsrC, lsrD, lsrF, lsrG, tam] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LsrR lsrRK[lsrK, lsrR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong LysR lysA[lysA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak LysR lysR[lysR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MalI malI[malI] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MalI malXY[malX, malY] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MalT malEFGH[malE, malF, malG, malH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Strong MalT malK-lamB-malM[lamB, malK, malM] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Strong MalT malPQ[malP, malQ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong MalT malS[malS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [] Weak MalT malZ[malZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak MarA acrAB[acrA, acrB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA acrZ[acrZ] + [COMP-HINF|W|Inferred by a human based on computational evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA aldA[aldA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA decR[decR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak MarA fpr[fpr] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA fumAC[fumC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA hcp-hcr-poxB-ltaE-ybjT[poxB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA hdeAB-yhiD[hdeA, hdeB, yhiD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-PURIFIED-PROTEIN|W|Assay of protein purified to homogeneity],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IDA-PURIFIED-PROTEIN|W|Assay of protein purified to homogeneity],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA inaA[inaA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA lacZYA[lacA, lacY, lacZ] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA marRAB[marA, marB, marR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA micF[micF] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA mlaFEDCB[mlaB, mlaC, mlaD, mlaE, mlaF] + [COMP-AINF|W|Inferred computationally without human oversight],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA nfo[nfo] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA nfsB[nfsB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA pqiABC[pqiA, pqiB, pqiC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA purA[purA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA putA[putA] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA rirA-waaQGPSBOJYZU[waaY, waaZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA rob[rob] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA slp-dctR[dctR, slp] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA sodA[sodA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MarA tolC-ygiBC[tolC, ygiB, ygiC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] Weak MarA xseA[xseA] + [COMP-AINF|W|Inferred computationally without human oversight],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA ybjC-nfsA-rimK-ybjN[nfsA, rimK, ybjC, ybjN] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA ycgZ-ymgA-ariR-ymgC[ariR, ycgZ, ymgA, ymgC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong MarA ymiC-acnA[acnA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarA yncE[yncE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MarA zwf[zwf] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MarR marRAB[marA, marB, marR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MatA ecpA[ecpA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MatA flhDC[flhC, flhD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MatA fliAZ-tcyJ[fliA, fliZ, tcyJ] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MatA fliCX[fliC, fliX] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MatA matA[matA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MazE relA-mazEFG[mazE, mazF, mazG] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong MazE-MazF relA-mazEFG[mazE, mazF, mazG] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong McbR mcbA[mcbA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong McbR rmf[rmf] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong McbR rsd[rsd] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong McbR yciGFE[yciE, yciF, yciG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MelR melAB[melA, melB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MelR melAB[melA, melB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MelR melR[melR] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MelR melR[melR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MetJ ahpCF[ahpC, ahpF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak MetJ folE-yeiB[folE, yeiB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MetJ metA[metA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MetJ metBL[metB, metL] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MetJ metC[metC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MetJ metE[metE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MetJ metF[metF] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong MetJ metK[metK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak MetJ metNIQ[metI, metN, metQ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MetJ metR[metR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MetR glyA[glyA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Strong MetR glyA[glyA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Strong MetR hmp[hmp] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Strong MetR metE[metE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MetR metH[metH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MetR metR[metR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong MhpR mhpABCDFE[mhpA, mhpB, mhpC, mhpD, mhpE, mhpF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Mlc malT[malT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Mlc manXYZ[manX, manY, manZ] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Mlc mlc-bidA[bidA, mlc] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Mlc ptsG[ptsG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Mlc ptsHI-crr[crr, ptsH, ptsI] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MlrA cadC[cadC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MlrA csgDEFG[csgD, csgE, csgF, csgG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MlrA ibaG-murA[ibaG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MlrA rplU-rpmA-yhbE-obgE[obgE, rplU, rpmA, yhbE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MngR mngAB[mngA, mngB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MngR mngR[mngR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong MntR dps[dps] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MntR mntH[mntH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MntR mntP[mntP] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MntR rybA-mntS[mntS, rybA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak ModE deoCABD[deoA, deoB, deoC, deoD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ModE dmsABC[dmsA, dmsB, dmsC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ModE hycABCDEFGHI[hycA, hycB, hycC, hycD, hycE, hycF, hycG, hycH, hycI] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ModE moaABCDE[moaA, moaB, moaC, moaD, moaE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ModE modABC[modA, modB, modC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ModE napFDAGHBC-ccmABCDEFGH[ccmA, ccmB, ccmC, ccmD, ccmE, ccmF, ccmG, ccmH, napA, napB, napC, napD, napF, napG, napH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ModE narXL[narL, narX] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ModE oppABCDF[oppA, oppB, oppC, oppD, oppF] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MprA acrAB[acrA, acrB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak MprA mprA-emrAB[emrA, emrB, mprA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong MprA nmpC[nmpC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak MqsA csgDEFG[csgD, csgE, csgF, csgG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MqsA cspD[cspD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MqsA mqsRA[mqsA, mqsR] - [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MqsA nlpD-rpoS[rpoS] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MraZ asnC-mioC-mnmG-rsmG[mioC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MraZ mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC[ddlB, ftsA, ftsI, ftsL, ftsQ, ftsW, ftsZ, lpxC, mraY, mraZ, murC, murD, murE, murF, murG, rsmH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong MurR murQP-yfeW[murP, murQ] - [COMP-AINF|W|Inferred computationally without human oversight],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF|W|Inferred computationally without human oversight] Strong MurR murR[murR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak MurR murR[murR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Nac asnC-mioC-mnmG-rsmG[asnC, mioC, mnmG] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Nac codBA[codA, codB] + [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong Nac feaR[feaR] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak Nac gdhA[gdhA] - [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Nac glaH-lhgD-gabDTP[gabD, gabP, gabT] + [COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Nac gltBDF[gltB, gltD, gltF] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Nac nac[nac] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Nac nupC[nupC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Nac serA[serA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[COMP-AINF-PATTERN-DISCOVERY|W|Automated inference based on sequence pattern discovery] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak Nac ydcSTUV-patD[patD, ydcS, ydcT, ydcU, ydcV] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA|W|Inferred from direct assay] [EXP-IDA|W|Inferred from direct assay],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NadR nadA-pnuC[nadA, pnuC] - [COMP-AINF|W|Inferred computationally without human oversight],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IMP|W|Inferred from mutant phenotype] Weak NadR nadB[nadB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Strong NadR pncB[pncB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Weak NagC chbBCARFG[chbA, chbB, chbC, chbF, chbG, chbR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NagC chiZPQ[chiP, chiQ, chiZ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NagC creABCD[creA, creB, creC, creD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak NagC dinI[dinI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak NagC feoABC[feoA, feoB, feoC] ? [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak NagC fimB[fimB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong NagC galP[galP] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong NagC glmUS[glmS, glmU] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Strong NagC glmUS[glmS, glmU] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Strong NagC manXYZ[manX, manY, manZ] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NagC nagBAC-umpH[nagA, nagB, nagC, umpH] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NagC nagE[nagE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NagC nanCMS[nanC, nanM, nanS] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NagC ptsHI-crr[crr, ptsH, ptsI] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] Weak NagC ydeNM[ydeM, ydeN] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Weak NagC ydeP[ydeP] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak NanR fimB[fimB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NanR nanATEKQ[nanA, nanE, nanK, nanQ, nanT] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NanR nanCMS[nanC, nanM, nanS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NanR nanXY[nanX, nanY] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL abgABT-ogt[ogt] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL adhE[adhE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL aspA-dcuA[aspA, dcuA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL caiF[caiF] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL citCDEFXG[citC, citD, citE, citF, citG, citX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] Weak NarL cydDC[cydC, cydD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL dcuB-fumB[dcuB, fumB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL dcuSR[dcuR, dcuS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL dmsABC[dmsA, dmsB, dmsC] - [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Strong NarL dpiBA[dpiA, dpiB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak NarL fdhF[fdhF] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL fdnGHI[fdnG, fdnH, fdnI] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL focA-pflB[focA, pflB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL frdABCD[frdA, frdB, frdC, frdD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong NarL hcp-hcr-poxB-ltaE-ybjT[hcp, hcr, poxB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL hyaABCDEF[hyaA, hyaB, hyaC, hyaD, hyaE, hyaF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL hybOABCDEFG[hybA, hybB, hybC, hybD, hybE, hybF, hybG, hybO] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL moeAB[moeA, moeB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL napFDAGHBC-ccmABCDEFGH[ccmA, ccmB, ccmC, ccmD, ccmE, ccmF, ccmG, ccmH, napA, napB, napC, napD, napF, napG, napH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL narGHJI[narG, narH, narI, narJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL narKS[narK, narS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong NarL nikABCDER[nikA, nikB, nikC, nikD, nikE, nikR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL nirBDC-cysG[cysG, nirB, nirC, nirD] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL norVW[norV, norW] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL nuoABCEFGHIJKLMN[nuoA, nuoB, nuoC, nuoE, nuoF, nuoG, nuoH, nuoI, nuoJ, nuoK, nuoL, nuoM, nuoN] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL ompW[ompW] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL torCAD[torA, torC, torD] - [] [EXP-IMP|W|Inferred from mutant phenotype] Weak NarL ubiCA[ubiA, ubiC] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarL ydeP[ydeP] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL ydhYVWXUT[ydhT, ydhU, ydhV, ydhW, ydhX, ydhY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL yeaR-yoaG[yeaR, yoaG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarL ynfEFGH-dmsD[dmsD, ynfE, ynfF, ynfG, ynfH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong NarL ytfE[ytfE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak NarP fdhF[fdhF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarP fdnGHI[fdnG, fdnH, fdnI] - [EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarP hcp-hcr-poxB-ltaE-ybjT[hcp, hcr, poxB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarP hyaABCDEF[hyaA, hyaB, hyaC, hyaD, hyaE, hyaF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarP napFDAGHBC-ccmABCDEFGH[ccmA, ccmB, ccmC, ccmD, ccmE, ccmF, ccmG, ccmH, napA, napB, napC, napD, napF, napG, napH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarP napFDAGHBC-ccmABCDEFGH[ccmA, ccmB, ccmC, ccmD, ccmE, ccmF, ccmG, ccmH, napA, napB, napC, napD, napF, napG, napH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarP nirBDC-cysG[cysG, nirB, nirC, nirD] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarP norVW[norV, norW] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarP nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarP ydeP[ydeP] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarP ydhYVWXUT[ydhT, ydhU, ydhV, ydhW, ydhX, ydhY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NarP yeaR-yoaG[yeaR, yoaG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NarP ytfE[ytfE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak NemR nemRA-gloA[gloA, nemA, nemR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NfeR nfeF[nfeF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NfeR nfeR[nfeR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NhaR nhaAR[nhaA, nhaR] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NhaR osmC[osmC] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NhaR pgaABCD[pgaA, pgaB, pgaC, pgaD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NikR nikABCDER[nikA, nikB, nikC, nikD, nikE, nikR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong NimR nimR[nimR] - [COMP-AINF|W|Inferred computationally without human oversight],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [COMP-AINF|W|Inferred computationally without human oversight],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NimR nimT[nimT] - [COMP-AINF|W|Inferred computationally without human oversight],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NorR norR[norR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NorR norVW[norV, norW] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NrdR nrdAB-yfaE[nrdA, nrdB, yfaE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NrdR nrdDG[nrdD, nrdG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NrdR nrdHIEF[nrdE, nrdF, nrdH, nrdI] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NsrR bamE[bamE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR bdcA[bdcA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR cdd[cdd] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR dkgB[dkgB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR dsdC[dsdC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR feaB[feaB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR feaR[feaR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR fliAZ-tcyJ[fliA, fliZ, tcyJ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] Strong NsrR grxD[grxD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR hcp-hcr-poxB-ltaE-ybjT[hcp, hcr, poxB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NsrR hmp[hmp] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR hycABCDEFGHI[hycA, hycB, hycC, hycD, hycE, hycF, hycG, hycH, hycI] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR hypABCDE-fhlA[fhlA, hypA, hypB, hypC, hypD, hypE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR lrp[lrp] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR mepH[mepH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR mhpT[mhpT] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR moeAB[moeA, moeB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR ndh[ndh] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR norR[norR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR nrfABCDEFG[nrfA, nrfB, nrfC, nrfD, nrfE, nrfF, nrfG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NsrR pdhR-aceEF-lpd[aceE, aceF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR pgpC-tadA[pgpC, tadA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR rfe-wzzE-wecBC-rffGHC-wecE-wzxE-wecF-wzyE-rffM[rfe, rffC, rffG, rffH, rffM, wecB, wecC, wecE, wecF, wzxE, wzyE, wzzE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR rybB[rybB] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR sodB[sodB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR sufABCDSE[sufA, sufB, sufC, sufD, sufE, sufS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR tehAB[tehA, tehB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR thrS-infC-rpmI-rplT-pheMST-ihfA[ihfA, infC, pheM, pheS, pheT, rplT, rpmI, thrS] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR tsgA[tsgA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR waaH[waaH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR ydbD[ydbD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR yeaE[yeaE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR yeaR-yoaG[yeaR, yoaG] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR ygbA[ygbA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NsrR ytfE[ytfE] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NtrC argT-hisJQMP[argT, hisJ, hisM, hisP, hisQ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NtrC astCADBE[astA, astB, astC, astD, astE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NtrC cbl[cbl] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NtrC ddpXABCDF[ddpA, ddpB, ddpC, ddpD, ddpF, ddpX] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NtrC glnALG[glnA, glnG, glnL] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NtrC glnALG[glnA, glnG, glnL] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong NtrC glnHPQ[glnH, glnP, glnQ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong NtrC glnHPQ[glnH, glnP, glnQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Strong NtrC glnK-amtB[amtB, glnK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [] Weak NtrC nac[nac] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [] Weak NtrC patA[patA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP|W|Inferred from expression pattern] Weak NtrC potFGHI[potF, potG, potH, potI] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NtrC relA-mazEFG[relA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong NtrC rseD-rpoE-rseABC[rpoE, rseA, rseB, rseC, rseD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong NtrC rutABCDEFG[rutA, rutB, rutC, rutD, rutE, rutF, rutG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NtrC yeaGH[yeaG, yeaH] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak NtrC yhdWXYZ[yhdW, yhdX, yhdY, yhdZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OmpR bdm-sra[sra] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OmpR bolA[bolA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong OmpR cadBA[cadA, cadB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR cadC[cadC] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR csgDEFG[csgD, csgE, csgF, csgG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR dtpA[dtpA] + [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR ecnAB[ecnB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak OmpR fadL[fadL] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR feoABC[feoA, feoB, feoC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR flhDC[flhC, flhD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [] Weak OmpR micF[micF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR nmpC[nmpC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong OmpR ompC[ompC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR ompF[ompF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR ompF[ompF] - [EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OmpR omrA[omrA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OmpR omrB[omrB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-SEQ|W|high throughput ChIP-seq evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OmpR pgaABCD[pgaA, pgaB, pgaC, pgaD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OxyR ahpCF[ahpC, ahpF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-SEQ-MANUAL|W|ChIP-seq evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR amiA-hemF[hemF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OxyR ccp[ccp] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence],] Strong OxyR dps[dps] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [,[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak OxyR dsbG[dsbG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OxyR elaB[elaB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OxyR elaB[elaB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OxyR fecABCDE[fecA, fecB, fecC, fecD, fecE] ? [] [] [] OxyR fhuF[fhuF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR fldA-uof-fur[fur, uof] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR gntP[gntP] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OxyR gor[gor] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OxyR grxA[grxA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-CHIP-CHIP-MANUAL|W|ChIP-chip evidence used in manual assertion],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR hcp-hcr-poxB-ltaE-ybjT[hcp, hcr, poxB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OxyR hemH[hemH] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong OxyR isrC-flu[flu, isrC] - [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR katG[katG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR metE[metE] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak OxyR metR[metR] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak OxyR mntH[mntH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR oxyR[oxyR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR oxyS[oxyS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR pth-ychF[ychF] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong OxyR sufABCDSE[sufA, sufB, sufC, sufD, sufE, sufS] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-CHIP-SEQ-MANUAL|W|ChIP-seq evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR trxC[trxC] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR uxuAB[uxuA, uxuB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak OxyR ybjC-nfsA-rimK-ybjN[nfsA, rimK, ybjC, ybjN] - [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR yjjZ[yjjZ] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong OxyR zinT[zinT] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak OxyR znuA[znuA] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak OxyR znuCB[znuB, znuC] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak PaaX paaABCDEFGHIJK[paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PaaX paaXY[paaX, paaY] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong PaaX paaZ[paaZ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdeL fliFGHIJK[fliF, fliG, fliH, fliI, fliJ, fliK] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdeL pdeL[pdeL] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-SEQ-MANUAL|W|ChIP-seq evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdhR cyoABCDE[cyoA, cyoB, cyoC, cyoD, cyoE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdhR fecABCDE[fecA, fecB, fecC, fecD, fecE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PdhR glcDEFGBA[glcA, glcB, glcD, glcE, glcF, glcG] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdhR grcA[grcA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PdhR hemL[hemL] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak PdhR mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC[ddlB, ftsA, ftsI, ftsL, ftsQ, ftsW, ftsZ, lpxC, mraY, mraZ, murC, murD, murE, murF, murG, rsmH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdhR ndh[ndh] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdhR pdhR-aceEF-lpd[aceE, aceF, lpd, pdhR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PdhR tomB-hha[hha, tomB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak PepA carAB[carA, carB] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IMP|W|Inferred from mutant phenotype] Strong PepA pepA[pepA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong PgrR ycjG[ycjG] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IGI|W|Inferred from genetic interaction] Strong PgrR ycjXF-tyrR[tyrR, ycjF, ycjX] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IGI|W|Inferred from genetic interaction] Strong PgrR ycjY-ymjDC-mpaA[mpaA, ycjY, ymjC, ymjD] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IGI|W|Inferred from genetic interaction] Strong PhoB adiC[adiC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB amn[amn] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB argP[argP] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB asr[asr] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB cra[cra] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB cusCFBA[cusA, cusB, cusC, cusF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB cusRS[cusR, cusS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB edd-eda[eda] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB feaR[feaR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB gadAXW[gadW, gadX] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB hiuH[hiuH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB mipA[mipA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB ompF[ompF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB phnCDEFGHIJKLMNOP[phnC, phnD, phnE, phnF, phnG, phnH, phnI, phnJ, phnK, phnL, phnM, phnN, phnO, phnP] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB phoA-psiF[phoA, psiF] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB phoBR[phoB, phoR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB phoE[phoE] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB phoH[phoH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB phoPQ[phoQ] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB pitB[pitB] - [] [EXP-IMP|W|Inferred from mutant phenotype] Weak PhoB prpR[prpR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB psiE[psiE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB pstSCAB-phoU[phoU, pstA, pstB, pstC, pstS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation],] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB rcdB[rcdB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB rspR[rspR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB sbcDC[sbcC, sbcD] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB talA-tktB[tktB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB ugpBAECQ[ugpA, ugpB, ugpC, ugpE, ugpQ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong PhoB ugpBAECQ[ugpA, ugpB, ugpC, ugpE, ugpQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong PhoB waaH[waaH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoB yegH[yegH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoB ytfK[ytfK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP acrAB[acrA, acrB] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP argD[argD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP borD[borD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong PhoP clpS[clpS] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP cysB[cysB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak PhoP dcuD[dcuD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP envY-ompT[ompT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP fadL[fadL] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP gadAXW[gadW] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP gadEF-mdtEF[gadE, gadF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP glgBXCAP[glgA, glgB, glgC, glgP, glgX] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP hdeAB-yhiD[hdeA, hdeB, yhiD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP hdeD[hdeD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP hemL[hemL] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP iraM[iraM] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong PhoP malS[malS] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP metBL[metB, metL] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP mgrB[mgrB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP mgrR[mgrR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP mgtLA[mgtA, mgtL] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP mgtS[mgtS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP nagBAC-umpH[nagA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP pagP[pagP] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP phoPQ[phoP, phoQ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP phoPQ[phoP, phoQ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP purHD[purD, purH] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP rstAB[rstA, rstB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP rutABCDEFG[rutA, rutB, rutC, rutD, rutE, rutF, rutG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP safA-ydeO[safA, ydeO] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP slyB[slyB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP slyB[slyB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP tolC-ygiBC[tolC, ygiB, ygiC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP treR[treR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PhoP ybjG[ybjG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP ydeP[ydeP] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PhoP yrbL[yrbL] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PlaR plaR[plaR] - [COMP-AINF|W|Inferred computationally without human oversight],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PlaR yiaKLMNO-lyxK-sgbHUE[lyxK, sgbE, sgbH, sgbU, yiaK, yiaL, yiaM, yiaN, yiaO] - [COMP-AINF|W|Inferred computationally without human oversight],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong PrpR prpBCDE[prpB, prpC, prpD, prpE] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Weak PrpR prpR[prpR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Weak PspF pspABCDE[pspA, pspB, pspC, pspD, pspE] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PspF pspF[pspF] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PspF pspGH[pspG, pspH] + [COMP|W|Inferred by computational analysis],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR carAB[carA, carB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR codBA[codA, codB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR cvpA-purF-ubiX[cvpA, purF, ubiX] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR gcvTHP[gcvH, gcvP, gcvT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR glrR-glnB[glnB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR glyA[glyA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR guaBA[guaA, guaB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR hflD-purB[hflD, purB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR lolB-ispE-prs[prs] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR purA[purA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR purC[purC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR purEK[purE, purK] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR purHD[purD, purH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR purL[purL] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR purMN[purM, purN] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR purR[purR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR purT[purT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR pyrC[pyrC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PurR pyrD[pyrD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PurR speAB[speA, speB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak PutA putA[putA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PutA putP[putP] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong PuuR puuA-ymjE-puuP[puuA, puuP, ymjE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong PuuR puuDRCBE[puuB, puuC, puuD, puuE, puuR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong PyrR yhjX[yhjX] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong QseB feaR[feaR] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak QseB feaR[feaR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak QseB fimAICDFGH[fimA, fimC, fimD, fimF, fimG, fimH, fimI] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak QseB flhDC[flhC, flhD] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak QseB qseBC[qseB, qseC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RbsR add[add] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RbsR purHD[purD, purH] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RbsR rbsDACBKR[rbsA, rbsB, rbsC, rbsD, rbsK, rbsR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcdA asr[asr] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong RcdA bluF[bluF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcdA csgDEFG[csgD, csgE, csgF, csgG] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[IC|W|Inferred by curator] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[IC|W|Inferred by curator] Strong RcdA rmf[rmf] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcdA rsd[rsd] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcdA sulA[sulA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcdA yagK[yagK] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong RcdA ydeI[ydeI] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RclR rclABC[rclA, rclB, rclC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcnR rcnAB[rcnA, rcnB] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcnR rcnR[rcnR] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsAB csgDEFG[csgD, csgE, csgF, csgG] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsAB flhDC[flhC, flhD] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsAB rcsA[rcsA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong RcsAB wza-wzb-wzc-wcaAB[wcaA, wcaB, wza, wzb, wzc] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong RcsAB yjbEFGH[yjbE, yjbF, yjbG, yjbH] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB bdm-sra[bdm, sra] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsB gadAXW[gadA, gadX] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsB gadBC[gadB, gadC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB gadY[gadY] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB hdeAB-yhiD[hdeA, hdeB, yhiD] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB hdeD[hdeD] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB lolA-rarA[lolA, rarA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC[ftsA, ftsZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsB osmB[osmB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB osmC[osmC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsB rprA[rprA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsB rseD-rpoE-rseABC[rpoE, rseA, rseB, rseC, rseD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong RcsB safA-ydeO[safA, ydeO] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB ydeP[ydeP] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsB-BglJ bglGFB[bglB, bglF, bglG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] Strong RcsB-BglJ leuO[leuO] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RcsB-BglJ sfsB[sfsB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ yecT[yecT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ yehF[yehF] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ ygiZ[ygiZ] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ yidL[yidL] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ ykiA[ykiA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ ynbABCD[ynbA, ynbB, ynbC, ynbD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ ynjI[ynjI] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RcsB-BglJ yqhG[yqhG] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RelB relBE-hokD[hokD, relB, relE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RelB-RelE relBE-hokD[hokD, relB, relE] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong RhaR rhaSR[rhaR, rhaS] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RhaS rhaBAD[rhaA, rhaB, rhaD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RhaS rhaSR[rhaR, rhaS] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RhaS rhaSR[rhaR, rhaS] ? [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong RhaS rhaT[rhaT] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RhaS rhaT[rhaT] ? [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong Rob acrAB[acrA, acrB] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Rob acrZ[acrZ] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob aldA[aldA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob aslB[aslB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob chaBC[chaC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob elaB[elaB] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob fadBA[fadA, fadB] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob fadL[fadL] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob fumAC[fumC] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP|W|Inferred from expression pattern],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Rob inaA[inaA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Rob ldtB[ldtB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob marRAB[marA, marB, marR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Rob micF[micF] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Rob mltF[mltF] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob nfo[nfo] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob nfsB[nfsB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob rob[rob] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Rob sodA[sodA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [] Weak Rob tolC-ygiBC[tolC, ygiB, ygiC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob ybjC-nfsA-rimK-ybjN[nfsA, rimK, ybjC, ybjN] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob yiaG[yiaG] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob ymiC-acnA[acnA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Rob zwf[zwf] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RspR rspAB[rspA, rspB] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RstA asr[asr] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RstA csgDEFG[csgD, csgE, csgF, csgG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RstA narGHJI[narG, narH, narI, narJ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [] Weak RstA ompF[ompF] - [AS-NAS|W|Non-traceable author statement],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [AS-NAS|W|Non-traceable author statement] Weak RtcR rtcBA[rtcA, rtcB] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RutR carAB[carA, carB] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RutR fepB[fepB] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RutR gadAXW[gadW, gadX] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RutR nemRA-gloA[gloA, nemA, nemR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RutR pdeR[pdeR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak RutR rutABCDEFG[rutA, rutB, rutC, rutD, rutE, rutF, rutG] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong RutR rutR[rutR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SdiA gadAXW[gadW] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SdiA gadY[gadY] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SdiA mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC[ftsQ] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SdiA mraZ-rsmH-ftsLI-murEF-mraY-murD-ftsW-murGC-ddlB-ftsQAZ-lpxC[ftsA, ftsQ, ftsZ] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong SdiA rflP[rflP] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SdiA rmf[rmf] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SdiA rsd[rsd] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SgrR alaC[alaC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SgrR sgrR-sroA-thiBPQ[sgrR, sroA, thiB, thiP, thiQ] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SgrR sgrST-setA[setA, sgrS, sgrT] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA casABCDE12[cas1, cas2, casA, casB, casC, casD, casE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA fecIR[fecI, fecR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA gspCDEFGHIJKLMO[gspC, gspD, gspE, gspF, gspG, gspH, gspI, gspJ, gspK, gspL, gspM, gspO] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA hlyE[hlyE] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA leuO[leuO] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA paaABCDEFGHIJK[paaA, paaB, paaC, paaD, paaE, paaF, paaG, paaH, paaI, paaJ, paaK] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA pagP[pagP] + [COMP-HINF-PATTERN-DISCOVERY|W|Manually curated inference based on sequence pattern discovery] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SlyA rmf[rmf] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SlyA rsd[rsd] + [EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxR aroF-tyrA[aroF, tyrA] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxR fumAC[fumC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxR sodA[sodA] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxR soxR[soxR] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxR soxS[soxS] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxR yjcB[yjcB] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxR yrbL[yrbL] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxS acrAB[acrA, acrB] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS acrZ[acrZ] + [COMP-HINF|W|Inferred by a human based on computational evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS aldA[aldA] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS decR[decR] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxS fldA-uof-fur[fldA, fur, uof] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS fldB[fldB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS fpr[fpr] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS fumAC[fumC] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS hcp-hcr-poxB-ltaE-ybjT[poxB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS inaA[inaA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxS marRAB[marA, marB, marR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxS micF[micF] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS nepI[nepI] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxS nfo[nfo] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxS nfsB[nfsB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxS ompW[ompW] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS pgi[pgi] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS pqiABC[pqiA, pqiB, pqiC] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxS ptsG[ptsG] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxS ribA[ribA] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS rirA-waaQGPSBOJYZU[waaY, waaZ] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxS rob[rob] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [] Strong SoxS sodA[sodA] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS soxS[soxS] - [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS tolC-ygiBC[tolC, ygiB, ygiC] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS ybjC-nfsA-rimK-ybjN[nfsA, rimK, ybjC, ybjN] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS ydbK-ompN[ompN, ydbK] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SoxS ymiC-acnA[acnA] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SoxS yrbL[yrbL] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion] [EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak SoxS zinT[zinT] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SoxS zwf[zwf] + [COMP-HINF|W|Inferred by a human based on computational evidence],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO-MANUAL|W|ChIP-exo evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Strong SrlR srlAEBD-gutM-srlR-gutQ[gutM, gutQ, srlA, srlB, srlD, srlE, srlR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak StpA bglGFB[bglB, bglF, bglG] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak StpA casABCDE12[cas1, cas2, casA, casB, casC, casD, casE] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong StpA leuO[leuO] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak StpA malEFGH[malE, malF, malG, malH] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak StpA ssrS-fau[fau, ssrS] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong StpA stpA[stpA] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak SutR cysE[cysE] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SutR fliAZ-tcyJ[fliA, fliZ, tcyJ] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SutR sutR[sutR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong SutR sutR[sutR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TdcA tdcABCDEFG[tdcA, tdcB, tdcC, tdcD, tdcE, tdcF, tdcG] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TdcR tdcABCDEFG[tdcA, tdcB, tdcC, tdcD, tdcE, tdcF, tdcG] + [EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong TorR gadAXW[gadA, gadX] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak TorR hdeAB-yhiD[hdeA, hdeB, yhiD] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak TorR tnaCAB[tnaA, tnaB, tnaC] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TorR torCAD[torA, torC, torD] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],] Strong TorR torR[torR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TreR treBC[treB, treC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TrpR aroH[aroH] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TrpR aroL-yaiA-aroM[aroL, aroM, yaiA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TrpR mtr[mtr] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-CHIP-MANUAL|W|ChIP-chip evidence used in manual assertion],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-MICROARRAY|W|high throughput expression microarray evidence] Strong TrpR trpLEDCBA[trpA, trpB, trpC, trpD, trpE, trpL] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TrpR trpR[trpR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR aroF-tyrA[aroF, tyrA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR aroG[aroG] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong TyrR aroL-yaiA-aroM[aroL, aroM, yaiA] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR aroP[aroP] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR folA[folA] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR mtr[mtr] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR tyrB[tyrB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR tyrP[tyrP] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR tyrP[tyrP] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong TyrR ycjXF-tyrR[tyrR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak UhpA uhpT[uhpT] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UidR uidABC[uidA, uidB, uidC] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak UidR uidR[uidR] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak UlaR ulaABCDEF[ulaA, ulaB, ulaC, ulaD, ulaE, ulaF] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UlaR ulaG[ulaG] - [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UvrY csrB[csrB] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UvrY csrC[csrC] + [EXP-CHIP-EXO|W|high throughput ChIP-exo evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UvrY luxS[luxS] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UvrY uhpT[uhpT] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UvrY ydeP[ydeP] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UxuR exuR[exuR] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UxuR gntP[gntP] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UxuR lgoR[lgoR] - [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UxuR uidABC[uidA, uidB, uidC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak UxuR uxuAB[uxuA, uxuB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong UxuR uxuR[uxuR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [,[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak XapR xapAB[xapA, xapB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak XylR araC[araC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong XylR xylAB[xylA, xylB] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong XylR xylE[xylE] + [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong XylR xylFGHR[xylF, xylG, xylH, xylR] + [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YdcI isrC-flu[flu, isrC] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[EXP-IEP-RNA-SEQ|W|high throughput RNA-seq evidence] Weak YdeO appCBXA[appA, appB, appC, appX] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YdeO gadAXW[gadW] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YdeO gadEF-mdtEF[gadE, gadF, mdtE, mdtF] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YdeO hyaABCDEF[hyaA, hyaB, hyaC, hyaD, hyaE, hyaF] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YdeO safA-ydeO[safA, ydeO] - [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak YdeO slp-dctR[dctR, slp] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YdeO yiiS-uspD[uspD, yiiS] + [COMP-HINF|W|Inferred by a human based on computational evidence],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YefM yefM-yoeB[yefM, yoeB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YefM-YoeB yefM-yoeB[yefM, yoeB] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-CELLULAR-EXTRACTS|W|Binding of cellular extracts],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YeiL yeiL[yeiL] + [] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak YhaJ bssS[bssS] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YjjQ flhDC[flhC, flhD] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YjjQ gfcA[gfcA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong YjjQ ompC[ompC] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak YjjQ ybhL[ybhL] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak YjjQ yfiR-dgcN-yfiB[dgcN, yfiB, yfiR] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak YjjQ ymiA-yciX[yciX, ymiA] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak YqhC yqhD-dkgA[dkgA, yqhD] + [EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ZntR zntA[zntA] + [EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IMP-SITE-MUTATION|S|Site mutation] [] Strong ZraR zraP[zraP] + [EXP-CHIP-SEQ-MANUAL|W|ChIP-seq evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong ZraR zraSR[zraR, zraS] + [EXP-CHIP-SEQ-MANUAL|W|ChIP-seq evidence used in manual assertion],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-CHIP-EXO|W|high throughput ChIP-exo evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] Strong Zur ykgMO[ykgM, ykgO] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences],[COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-DAP-SEQ|W|high throughput DNA Affinity Purification (DAP) Sequencing],[EXP-GSELEX|W|high throughput Genomic SELEX-chip evidence] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Weak Zur zinT[zinT] - [COMP-AINF-SIMILAR-TO-CONSENSUS|W|Automated inference based on similarity to consensus sequences] [] Weak Zur znuA[znuA] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins],[EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong Zur znuCB[znuB, znuC] - [COMP-HINF-SIMILAR-TO-CONSENSUS|W|A person inferred or reviewed a computer inference of sequence function based on similarity to a consensus sequence.],[EXP-IDA-BINDING-OF-PURIFIED-PROTEINS|S|Binding of purified proteins] [EXP-IEP-GENE-EXPRESSION-ANALYSIS|W|Gene expression analysis] Strong