RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by Cra,- regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


Cra,- Regulatory phrases      

Cra,- phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      tpiAp
      tpiAp2
      glkp2
      glkp4
      hypFp2
      marRp
      ptsHp1
      ppcp
      mplp1
      mplp
      pfkAp
      zwfp
      fbaBp
      pfkAp2
      gpmMp1
      mtlAp
      nirBp
      glcCp
      epdp2
      epdp
      eddp
      hypFp3
      pykFp
    gapAp1
    gapAp
    enop1
    enop2
    pdeLp1
    enop3
    fruBp
      sgrSp2
      sgrSp
      cyoAp
      pdhRp
      pdhRp2
      prpBp
    gapAp2
    gapAp3
    gapAp4
      adhEp
      adhEp1
      manXp


Cra,- phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  tpiAp
  tpiAp2
  glkp2
  glkp4
  hypFp2
  [AcrR,-,-40.5] [MarR,-,17.0,-18.0] [CpxR,+,-29.0] [MarA,+,-61.5] [SoxS,+,-61.5] [Rob,+,-61.5] [CRP,+,-52.5] [Fis,+,-81.0] marRp
  [CRP,+,-42.5] ptsHp1
  ppcp
  [CRP,+,-37.5] mplp1
  [CRP,+,-37.5] mplp
  pfkAp
  [MarA,+,-54.0] [SoxS,+,-51.5] [Rob,+,-54.0] zwfp
  fbaBp
  pfkAp2
  gpmMp1
  [CRP,+,-175.5,-219.5,-102.5,-261.5] [CRP,+,-58.5] [Fis,-,137.0] mtlAp
  [IHF,+,-115.0] [Fis,-,-142.0,-97.0] [CRP,-,-296.5] [IHF,-,-88.0] [NarP,+,-74.0,-65.0] [NarL,+,-65.0,-74.0] [Fis,-,23.0] [CRP,-,-41.5] [FNR,+,-41.5] nirBp
  [Fis,-,-120.0] [Fis,-,-66.0,-90.0] [CRP,+,-18.5] [GlcC,-,47.0] [Fis,-,72.0] glcCp
  [CRP,+,-70.5] epdp2
  [CRP,+,-70.5] epdp
  [GntR,-,-93.5] [KdgR,-,-76.0] [GntR,-,128.5] eddp
  hypFp3
  pykFp
  gapAp1
  gapAp
  enop1
  enop2
  pdeLp1
  enop3
  fruBp
  [SgrR,+,-53.5] sgrSp2
  [SgrR,+,-53.5] sgrSp
  [PdhR,-,-177.0] [ArcA,-,-200.0] [CRP,+,-191.5] [FNR,-,-192.5] [Fur,-,-213.0] [CRP,+,-37.5] [HprR,-,69.5] [CusR,+,69.5] cyoAp
  [BtsR,-,-203.0,-188.0] [CRP,+,-377.5,-110.5] [PdhR,-,19.0] [CRP,+,-70.5,-62.5,-82.5,-50.5] [FNR,+,-50.5] [FNR,-,-50.5] pdhRp
  [BtsR,-,-203.0,-188.0] [CRP,+,-377.5,-110.5] [PdhR,-,19.0] [CRP,+,-50.5,-70.5,-82.5,-62.5] [FNR,+,-50.5] [FNR,-,-50.5] pdhRp2
  [PrpR,+,-113.5,-147.5] [CRP,+,-106.5] prpBp
  gapAp2
  [CRP,+,-41.5] gapAp3
  gapAp4
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-6.0,-65.0] [Fis,+,-68.0,-42.0] [NarL,-,90.0,81.0] adhEp
  [Lrp,-,-157.0] [Fis,+,-148.0] [Lrp,-,-65.0,-6.0] [Fis,+,-42.0,-68.0] [NarL,-,81.0,90.0] adhEp1
  [Mlc,-,-13.0,-79.0] [NagC,-,4.0,-80.0] [CRP,+,-92.5,-40.5] manXp

  

  

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