RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [NtrC,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[NtrC,+] Regulatory phrases      

[NtrC,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [NtrC,+,-87]   glnKp
    [NtrC,+,-33.5]   rseDp
    [NtrC,+,-33.5]   rpoEp2b
  [NtrC,+,-190] [NtrC,+,-83]   argTp
  [NtrC,+,-109] [NtrC,+,-88]   ddpXp1
  [NtrC,+,-140] [NtrC,+,-108] [NtrC,+,-89] [NtrC,+,-68] [NtrC,+,-45]   glnAp2
  [NtrC,+,-152]     nacp
  [NtrC,+,-145] [NtrC,+,-124]     rutAp
  [NtrC,+,-126] [NtrC,+,-96]     yhdWp
  [NtrC,+,-122] [NtrC,+,-109]     glnHp2
  [NtrC,+,-543] [NtrC,+,-193] [NtrC,+,-171]     patAp2
  [NtrC,+,-543] [NtrC,+,-193] [NtrC,+,-171]     patAp
  [NtrC,+,-275] [NtrC,+,-253] [NtrC,+,-233]     astCp2


[NtrC,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [NtrC,+,-87.0] glnKp
  [GlrR,+,-65.5,-26.5,-90.5] [NtrC,+,-33.5] [CRP,+,-23.0] [RcsB,+,-52.5] rseDp
  [GlrR,+,-90.5,-26.5,-65.5] [NtrC,+,-33.5] [CRP,+,-23.0] [RcsB,+,-52.5] rpoEp2b
  [NtrC,+,-190.0] [NtrC,+,-83.0] argTp
  [NtrC,+,-109.0] [NtrC,+,-88.0] ddpXp1
  [NtrC,+,-108.0,-140.0] [CRP,-,-55.5,-57.5] [NtrC,+,-45.0,-89.0,-68.0] [Fis,+,-55.0] glnAp2
  [NtrC,+,-152.0] [Nac,-,-75.0] nacp
  [NtrC,+,-124.0,-145.0] [ArcA,+,-97.0] [RutR,-,-102.5] [PhoP,+,-106.0] rutAp
  [NtrC,+,-126.0,-96.0] yhdWp
  [NtrC,-,-135.0] [NtrC,+,-122.0,-109.0] [IHF,+,-152.0] [NtrC,-,-79.0] [IHF,+,-47.0] glnHp2
  [IHF,?,-256.0] [NtrC,+,-193.0,-543.0,-171.0] [Fis,?,-121.0] patAp2
  [IHF,?,-256.0] [NtrC,+,-193.0,-543.0,-171.0] [Fis,?,-121.0] patAp
  [NtrC,+,-275.0,-253.0,-233.0] [ArgR,+,-121.5,-99.5] [ArgR,+,-78.5,-47.5] astCp2

  

  

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