RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by ArcA,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


ArcA,+ Regulatory phrases      

ArcA,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      cydAp2
      cydDp
      focAp2
      hyaAp
      hyaAp2
    iraMp1
    grcAp1
    focAp1
  cydAp1
  caiTp
      dcuCp
      treBp
      appYp2
      moeAp
      rutAp
      dpiBp1
      sdhCp
      ybdNp


ArcA,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [FNR,+,-167.5] [FNR,-,-115.5] cydAp2
  [NarL,+,-126.0] [NarL,+,-80.0] [FNR,+,-90.5] cydDp
  focAp2
  [YdeO,+,-61.0] [IscR,-,-39.0,-42.0] [NarP,-,7.0,-10.0] [NarL,-,7.0,-10.0] [Fis,-,-21.0] hyaAp
  [YdeO,+,-61.0] [IscR,-,-39.0,-42.0] [NarP,-,-10.0,7.0] [NarL,-,7.0,-10.0] [Fis,-,-21.0] hyaAp2
  [PhoP,+,-199.5] [FNR,+,-70.5] [PhoP,+,-68.0] iraMp1
  [Fis,+,-159.0,-117.0] [FNR,-,-93.5] [PdhR,-,17.0] [CRP,+,-40.5] [Fis,+,-10.0] [FNR,+,-40.5] [FNR,-,-40.5] grcAp1
  [IHF,+,-112.5] [NarL,-,-152.0,-226.0,-253.0,-270.0,-286.0,-101.0,-235.0,-346.0,-348.0] [NarL,-,-20.0,-37.0] [CRP,+,-40.5] [FNR,+,-40.5] focAp1
  [FNR,-,-53.5,-1.5] cydAp1
  [CaiF,+,-151.5,-227.5,-208.5,-170.5] [CRP,+,-41.5] [FNR,+,-41.5,-90.5] caiTp
  [FNR,+,-115.5] [FNR,+,-33.5,-63.5] dcuCp
  [CRP,-,12.0] [TreR,-,-81.0,-48.0] [CRP,?,-60.5] treBp
  appYp2
  [NarL,+,-177.0,-109.0] [FNR,-,34.5] moeAp
  [RutR,-,-102.5] [NtrC,+,-124.0,-145.0] [PhoP,+,-106.0] rutAp
  [NarL,-,20.0] [CRP,-,45.5] [DpiA,+,104.0,146.0,77.0] [FNR,-,45.5] dpiBp1
  [ArcA,-,-27.0,-32.0] [CRP,+,-83.5] [Fur,+,-34.0] [ArcA,-,257.0] sdhCp
  [CysB,+,-177.5] [FNR,+,-303.5] [FNR,+,-26.5] ybdNp

  

  

RegulonDB