RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [PhoB,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[PhoB,+] Regulatory phrases      

[PhoB,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [PhoB,+,-57]   cusRp
    [PhoB,+,-54]   cusCp
    [PhoB,+,-33]   amnp1
    [PhoB,+,-31]   phoHp1
    [PhoB,+,-31]   phoAp
    [PhoB,+,-31]   phoBp
    [PhoB,+,-30]   asrp2
    [PhoB,+,-30]   asrp
    [PhoB,+,-27]   argPp
    [PhoB,+,-20]   ydfHp
    [PhoB,+,-58] [PhoB,+,-36]   ytfKp1
    [PhoB,+,-54] [PhoB,+,-32]   pstSp2
    [PhoB,+,-54] [PhoB,+,-32]   pstSp
    [PhoB,+,-53] [PhoB,+,-31]   psiEp
    [PhoB,+,-52] [PhoB,+,-30]   ugpBp1
  [PhoB,+,-113] [PhoB,+,-59.5]   yibDp1
  [PhoB,+,-113] [PhoB,+,-88] [PhoB,+,-32]   phoEp
  [PhoB,+,-146.5]     mipAp


[PhoB,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [PhoB,+,-57.0] [HprR,+,-57.5] [CusR,+,-57.5] cusRp
  [PhoB,+,-54.0] [HprR,+,-53.5] [CusR,+,-53.5] cusCp
  [PhoB,+,-33.0] amnp1
  [PhoB,+,-31.0] phoHp1
  [PhoB,+,-31.0] phoAp
  [PhoB,+,-31.0] phoBp
  [RcdA,+,-68.5,-58.5] [RstA,+,-62.0] [PhoB,+,-30.0] asrp2
  [RcdA,+,-68.5,-58.5] [RstA,+,-62.0] [PhoB,+,-30.0] asrp
  [PhoB,+,-27.0] [ArgP,-,-16.5,-36.5] argPp
  [PhoB,+,-20.0] ydfHp
  [PhoB,+,-36.0,-58.0] ytfKp1
  [IHF,+,16.5] [PhoB,+,-32.0,-54.0] pstSp2
  [IHF,+,16.5] [PhoB,+,-54.0,-32.0] pstSp
  [CRP,-,-25.0] [PhoB,+,-53.0,-31.0] psiEp
  [PhoB,+,-52.0,-30.0] ugpBp1
  [NsrR,-,-115.0] [PhoB,+,-113.0] [PhoB,+,-59.5] yibDp1
  [PhoB,+,-113.0] [PhoB,+,-32.0,-88.0] phoEp
  [PhoB,+,-146.5] mipAp

  

  

RegulonDB