RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [RcsB,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[RcsB,+] Regulatory phrases      

[RcsB,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [RcsB,+,-64.5]   gadBp2
    [RcsB,+,-64.5]   gadBp
    [RcsB,+,-52.5]   rseDp
    [RcsB,+,-52.5]   rpoEp2b
    [RcsB,+,-43.5]   ftsAp1
    [RcsB,+,-43.5]   lolAp
    [RcsB,+,-42.5]   rprAp
    [RcsB,+,-41.5]   bdmp
    [RcsB,+,-41.5]   osmBp1
    [RcsB,+,-41.5]   osmCp1


[RcsB,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [GadX,+,-268.0,-231.5,-210.5,-184.0,-98.5,-119.5] [GadW,-,-119.5,-98.5,-231.5,-210.5] [Fis,-,-105.0] [GadW,+,-98.5,-210.5,-231.5,-119.5] [GadX,+,-39.5,-17.5] [GadE,+,-62.5] [Fis,-,-27.0,-59.0] [CRP,-,-63.5] [RcsB,+,-64.5] [Fis,-,37.0] gadBp2
  [GadX,+,-210.5,-184.0,-98.5,-119.5,-268.0,-231.5] [GadW,-,-210.5,-119.5,-231.5,-98.5] [Fis,-,-105.0] [GadW,+,-231.5,-119.5,-210.5,-98.5] [GadX,+,-17.5,-39.5] [GadE,+,-62.5] [Fis,-,-59.0,-27.0] [CRP,-,-63.5] [RcsB,+,-64.5] [Fis,-,37.0] gadBp
  [GlrR,+,-65.5,-26.5,-90.5] [NtrC,+,-33.5] [CRP,+,-23.0] [RcsB,+,-52.5] rseDp
  [GlrR,+,-90.5,-26.5,-65.5] [NtrC,+,-33.5] [CRP,+,-23.0] [RcsB,+,-52.5] rpoEp2b
  [RcsB,+,-43.5] ftsAp1
  [RcsB,+,-43.5] lolAp
  [RcsB,+,-42.5] rprAp
  [RcsB,+,-41.5] bdmp
  [RcsB,+,-41.5] osmBp1
  [Lrp,-,-52.0] [NhaR,+,-42.0] [RcsB,+,-41.5] osmCp1

  

  

RegulonDB