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List of promoters with sites of this regulated phrase.
Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.
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Promoters and their regulatory phrases |
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| [CsgD,-] phrase |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [CsgD,-,-10.5] | fliAp1 | |||
| [CsgD,-,2] | pepDp3 | |||
| [CsgD,-,-85.5] [CsgD,-,-70.5] | fliFp1 | |||
| [CsgD,-,-39.5] [CsgD,-,-24.5] | fliEp1 | |||
| [CsgD,-,-12.5] [CsgD,-,15.5] | ubiTp2 | |||
| [CsgD,-,1.5] [CsgD,-,17.5] | flgMp | |||
| [CsgD,-,18.5] | [CsgD,-,33.5] | fliEp2 |
| [CsgD,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases. |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [NsrR,-,-207.0] [IHF,-,-202.5,-186.5] | [CsgD,-,-10.5] [FlhDC,+,-67.0,-38.0] [NsrR,-,7.0] | fliAp1 | ||
| [CsgD,-,2.0] | pepDp3 | |||
| [CsgD,-,-70.5,-85.5] [FlhDC,+,-69.5,-41.0] | fliFp1 | |||
| [CsgD,-,-39.5,-24.5] [FlhDC,+,-69.0,-40.5] | fliEp1 | |||
| [CsgD,-,-12.5,15.5] | ubiTp2 | |||
| [CsgD,-,1.5,17.5] | flgMp | |||
| [CsgD,-,18.5] | [CsgD,-,33.5] | fliEp2 |
