RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [RcdA,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[RcdA,+] Regulatory phrases      

[RcdA,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [RcdA,+,-68.5] [RcdA,+,-58.5]   asrp
    [RcdA,+,-68.5] [RcdA,+,-58.5]   asrp2
  [RcdA,+,-298.5]     csgDp3
  [RcdA,+,-298.5]     csgDp1
  [RcdA,+,-222.5] [RcdA,+,-211.5]     bluFp


[RcdA,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [PhoB,+,-30.0] [RcdA,+,-68.5,-58.5] [RstA,+,-62.0] asrp
  [PhoB,+,-30.0] [RcdA,+,-68.5,-58.5] [RstA,+,-62.0] asrp2
  [CsgD,+,-118.5,-166.5] [RcdA,+,-298.5] [CRP,+,-170.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-178.0,-186.0,-141.0,-108.5,-166.0,-95.5,-100.0,-129.5] [Cra,+,-196.5,-227.5,-563.5] [CsgD,+,29.5] [BtsR,-,-25.0] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,-21.5,-43.0,-48.0,-73.5,-52.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp3
  [CsgD,+,-166.5,-118.5] [RcdA,+,-298.5] [CRP,+,-170.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-166.0,-178.0,-186.0,-129.5,-100.0,-108.5,-95.5,-141.0] [Cra,+,-563.5,-196.5,-227.5] [CsgD,+,29.5] [BtsR,-,-25.0] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,-48.0,-73.5,-21.5,-52.0,-43.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp1
  [RcdA,+,-222.5,-211.5] bluFp

  

  

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