RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by MarA,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


MarA,+ Regulatory phrases      

MarA,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      acrAp
      decRp
      ycgZp2
      ycgZp
      marRp
      poxBp2
      poxBp1
      fprp
      zwfp
      tolCp4
      acnAp2
      fumCp2
      nfsBp
      waaYp
      pqiAp3
      pqiAp1
      xseAp
      mlaFp2
      yncEp
      inaAp
      tolCp3
      ybjCp
      sodAp
      acrZp
      micFp2
      micFp1
      nfop
      aldAp


MarA,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [AcrR,-,-22.5] [EnvR,-,-22.5] [SoxS,+,-72.5] [MprA,-,-16.0] [PhoP,-,32.0] acrAp
  [SoxS,+,-63.0] decRp
  [BluR,-,-29.5] ycgZp2
  [BluR,-,-29.5] ycgZp
  [AcrR,-,-40.5] [MarR,-,17.0,-18.0] [CpxR,+,-29.0] [SoxS,+,-61.5] [Rob,+,-61.5] [CRP,+,-52.5] [Fis,+,-81.0] [Cra,-,-72.5] marRp
  [SoxS,+,-60.5] poxBp2
  [SoxS,+,-60.5] poxBp1
  [SoxS,+,-56.5] fprp
  [SoxS,+,-51.5] [Rob,+,-54.0] [Cra,-,-35.5] zwfp
  [SoxS,+,-52.5] [Rob,+,-52.5] tolCp4
  [ArcA,-,-34.0] [SoxS,+,-51.5] [Rob,+,-51.5] [CRP,+,-40.5] [FNR,-,-40.5] acnAp2
  [CRP,?,-484.5] [SoxS,+,19.5] [CRP,+,-53.5] fumCp2
  [SoxS,+,-43.5] [Rob,+,-43.5] nfsBp
  [SoxS,+,-42.5] waaYp
  [SoxS,+,-40.0] pqiAp3
  [SoxS,+,-40.0] pqiAp1
  [CRP,-,28.5] xseAp
  mlaFp2
  yncEp
  [SoxS,+,-41.5] [Rob,+,-41.5] inaAp
  [SoxS,+,-40.5] [Rob,+,-40.5] tolCp3
  [OxyR,-,-72.0,-50.0] [SoxS,+,-40.5,-56.5] [Rob,+,-40.5] ybjCp
  [CRP,+,-99.5] [ArcA,-,-10.0,-38.0,-21.0] [IHF,-,-48.0,-1.0,-68.0,-24.0] [SoxS,+,-44.0] [Rob,+,-40.5] [FNR,-,-37.5] [SoxR,+,9.0] [Fur,-,-36.0,-30.0,-33.0,-42.0] sodAp
  [SoxS,+,-40.5] [Rob,+,-40.5] acrZp
  [OmpR,+,-186.5,-206.5,-165.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,122.0,87.5,58.5] micFp2
  [OmpR,+,-206.5,-165.5,-186.5] [SoxS,+,-119.5] [Lrp,-,27.5] [IHF,-,-72.0] [SoxS,+,-38.5] [Rob,+,-40.0] [AcrR,-,41.0] [Lrp,-,122.0,58.5,87.5] micFp1
  [SoxS,+,-26.0,-37.0] [Rob,+,-38.5] nfop
  [ArcA,-,-157.0,-137.0] [SoxS,+,-161.0] [Rob,+,-161.0] [ArcA,-,2.0,13.0,-5.0] [DnaA,-,-7.5] [CRP,+,-59.5] [FNR,-,-10.5] aldAp

  

  

RegulonDB