RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by PhoP,+ regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


PhoP,+ Regulatory phrases      

PhoP,+ phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
      gadEp1
      ompTp
      tolCp2
      mgrRp
      rstAp
      cysBp
      mgtSp
      iraMp2
      mgtAp1
      glgBp
      slyBp1
      borDp
      mgrBp
      hdeAp
      hdeAp2
      pagPp
      ybjGp
      hemLp
      nagAp
      gadWp2
      yrbLp
      metBp
      phoPp2
    iraMp1
      purHp
      fadLp
      malSp
      hdeDp
      hdeDp2
      rutAp


PhoP,+ phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  gadEp1
  ompTp
  tolCp2
  mgrRp
  rstAp
  [CysB,-,-14.0] cysBp
  mgtSp
  iraMp2
  mgtAp1
  glgBp
  slyBp1
  borDp
  mgrBp
  [GadX,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-159.0,-116.0,-97.0] [H-NS,-,-118.0] [GadW,-,-126.5] [GadW,+,-126.5] [GadX,+,-53.5,-74.5] [GadE,+,9.5] [TorR,+,-27.5,-51.5] [GadX,-,-74.5,-53.5] [Lrp,-,-64.0,-55.0,-18.0] [FliZ,-,8.0] [GadW,-,-53.5,-74.5] [GadW,+,-74.5,-53.5] [MarA,-,-39.0] hdeAp
  [GadX,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-97.0,-159.0,-116.0] [H-NS,-,-118.0] [GadW,-,-126.5] [GadW,+,-126.5] [GadX,+,-53.5,-74.5] [GadE,+,9.5] [TorR,+,-51.5,-27.5] [GadX,-,-74.5,-53.5] [Lrp,-,-18.0,-55.0,-64.0] [FliZ,-,8.0] [GadW,-,-74.5,-53.5] [GadW,+,-74.5,-53.5] [MarA,-,-39.0] hdeAp2
  [SlyA,+,-109.5] [SlyA,+,-10.0,-89.0] pagPp
  ybjGp
  [PdhR,-,-165.0] hemLp
  nagAp
  [GadX,-,-96.5] [GadX,-,-32.5,-68.5,-53.5] [GadW,-,-53.5,-32.5] gadWp2
  [BasR,-,-52.5] [SoxS,+,-26.0] [SoxR,+,36.0] yrbLp
  [MetJ,-,-38.5,-56.5,-48.5,-30.5,-46.5,-40.5] metBp
  phoPp2
  [ArcA,+,-170.5] [ArcA,+,-16.5] [FNR,+,-70.5] iraMp1
  [PurR,-,-20.5] [RbsR,-,-20.5] purHp
  [OmpR,-,-149.5] [CRP,+,-157.5] [OmpR,-,-60.5] [ArcA,-,-38.0] [FadR,-,-17.0,9.0] [OmpR,-,119.5,69.5] fadLp
  [CRP,+,-231.5] [MalT,+,-74.5,-61.5,-37.5] malSp
  [GadX,+,-94.5,-115.5] [GadE,+,-51.5] hdeDp
  [GadX,+,-115.5,-94.5] [GadE,+,-51.5] hdeDp2
  [ArcA,+,-97.0] [RutR,-,-102.5] [NtrC,+,-124.0,-145.0] rutAp

  

  

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