|
|
|
List of promoters with sites of this regulated phrase.
Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.
|
Promoters and their regulatory phrases |
|
|
| [GntR,-] phrase |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [GntR,-,-15] | gntXp | |||
| [GntR,-,2.5] [GntR,-,15.5] | gntKp | |||
| [GntR,-,-108.5] | [GntR,-,-78.5] [GntR,-,-58.5] | idnDp | ||
| [GntR,-,-103.5] | [GntR,-,-83.5] [GntR,-,-53.5] | idnKp | ||
| [GntR,-,-58.5] | [GntR,-,83.5] | gntTp3 | ||
| [GntR,-,-55.5] | [GntR,-,86.5] | gntTp2 | ||
| [GntR,-,-14.5] | [GntR,-,127.5] | gntTp1 | ||
| [GntR,-,-93.5] | [GntR,-,128.5] | eddp |
| [GntR,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases. |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [CRP,+,-41.5] [GntR,-,-15.0] | gntXp | |||
| [IdnR,-,15.5,2.5] [CRP,+,-68.5] [GntR,-,15.5,2.5] | gntKp | |||
| [GntR,-,-108.5] | [CRP,+,-91.5,-41.5] [IdnR,+,-78.5] [GntR,-,-78.5,-58.5] | idnDp | ||
| [CRP,+,-120.5] [GntR,-,-103.5] | [CRP,+,-70.5] [IdnR,+,-83.5] [GntR,-,-53.5,-83.5] | idnKp | ||
| [CRP,+,-115.5] | [GntR,-,-58.5] | [GntR,-,83.5] | gntTp3 | |
| [CRP,+,-112.5] | [GntR,-,-55.5] | [GntR,-,86.5] | gntTp2 | |
| [CRP,+,-71.5] [GntR,-,-14.5] | [GntR,-,127.5] | gntTp1 | ||
| [GntR,-,-93.5] | [KdgR,-,-76.0] [Cra,-,4.5] | [GntR,-,128.5] | eddp |
