RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [RcsB-BglJ,+] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[RcsB-BglJ,+] Regulatory phrases      

[RcsB-BglJ,+] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [RcsB-BglJ,+,-78.5]   ykiAp
    [RcsB-BglJ,+,-75.5]   bglGp2
    [RcsB-BglJ,+,-68.5]   yecTp
    [RcsB-BglJ,+,-67.5]   sfsBp
    [RcsB-BglJ,+,-66.5]   yehFp
    [RcsB-BglJ,+,-65.5]   ynjIp
    [RcsB-BglJ,+,-65.5]   ygiZp
    [RcsB-BglJ,+,-65.5]   ynbAp
    [RcsB-BglJ,+,-58.5]   leuOp2
    [RcsB-BglJ,+,-51.5]   yidLp
    [RcsB-BglJ,+,-44.5]   yqhGp
  [RcsB-BglJ,+,-95.5]     bglGp1


[RcsB-BglJ,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [RcsB-BglJ,+,-78.5] ykiAp
  [RcsB-BglJ,+,-75.5] [CRP,+,-41.5] bglGp2
  [RcsB-BglJ,+,-68.5] yecTp
  [RcsB-BglJ,+,-67.5] sfsBp
  [LexA,-,11.5] [RcsB-BglJ,+,-66.5] yehFp
  [RcsB-BglJ,+,-65.5] ynjIp
  [RcsB-BglJ,+,-65.5] ygiZp
  [RcsB-BglJ,+,-65.5] ynbAp
  [H-NS,-,-212.0] [LeuO,+,-280.0,-172.0,-195.0,-254.0] [LeuO,-,-280.0,-172.0,-195.0,-254.0] [RcsB-BglJ,+,-58.5] leuOp2
  [RcsB-BglJ,+,-51.5] yidLp
  [RcsB-BglJ,+,-44.5] yqhGp
  [LeuO,+,-149.0,-118.0] [RcsB-BglJ,+,-95.5] [Fis,-,-52.0,-27.0] [CRP,+,-61.5] [H-NS,-,680.0] bglGp1

  

  

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