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List of promoters with sites of this regulated phrase.
Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.
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Promoters and their regulatory phrases |
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| [AraC,+] phrase |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [AraC,+,-65] [AraC,+,-44] | araEp | |||
| [AraC,+,-64] [AraC,+,-43] | araJp | |||
| [AraC,+,-64] [AraC,+,-43] | araBp | |||
| [AraC,+,-105] | [AraC,+,-84] | araCp | ||
| [AraC,+,-166] [AraC,+,-145] | [AraC,+,-91] [AraC,+,-70] | araFp3 | ||
| [AraC,+,-166] [AraC,+,-145] | [AraC,+,-91] [AraC,+,-70] | araFp1 |
| [AraC,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases. |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [CRP,+,-94.5] | [AraC,+,-44.0,-65.0] | araEp | ||
| [CRP,+,-90.5] [AraC,+,-43.0,-64.0] | [CRP,-,44.5] | araJp | ||
| [AraC,-,-275.0,-117.0,-138.0] [CRP,+,-93.5] | [AraC,-,-64.0] [AraC,+,-64.0,-43.0] | araBp | ||
| [AraC,+,-105.0] | [AraC,-,-31.0,-84.0,-10.0] [XylR,-,2.5,-19.5] [CRP,+,-54.5] [AraC,+,-84.0] | [AraC,-,128.0] | araCp | |
| [AraC,+,-145.0,-166.0] | [CRP,+,-42.5] [AraC,+,-70.0,-91.0] | araFp3 | ||
| [AraC,+,-145.0,-166.0] | [CRP,+,-42.5] [AraC,+,-91.0,-70.0] | araFp1 |
