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List of promoters with sites of this regulated phrase.
Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.
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Promoters and their regulatory phrases |
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| [YjjQ,-] phrase |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [YjjQ,-,-65] | yfiRp | |||
| [YjjQ,-,-64] | ompCp1 | |||
| [YjjQ,-,-6] | ymiAp | |||
| [YjjQ,-,2] | ybhLp | |||
| [YjjQ,-,11] | flhDp | |||
| [YjjQ,-,-49] [YjjQ,-,-16] | gfcAp |
| [YjjQ,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases. |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [YjjQ,-,-65.0] | yfiRp | |||
| [Lrp,-,-340.5,-280.5,-311.5,-376.0] [IHF,-,-182.0] [CpxR,+,-95.0,-134.0,-351.0] | [OmpR,+,-88.5,-47.5,-67.5] [Lrp,-,-29.5,2.0] [YjjQ,-,-64.0] | [Lrp,-,64.5,86.0] | ompCp1 | |
| [YjjQ,-,-6.0] | ymiAp | |||
| [YjjQ,-,2.0] | ybhLp | |||
| [OmpR,-,-145.5] [LrhA,-,-112.0] | [AcrR,-,-31.5] [OmpR,-,18.5] [CRP,+,-71.5] [IHF,-,-92.0] [FliZ,-,12.0] [RcsAB,-,11.0] [YjjQ,-,11.0] | [Fur,-,115.0] | flhDp | |
| [YjjQ,-,-16.0,-49.0] | gfcAp |
