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List of promoters with sites of this regulated phrase.
Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.
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Promoters and their regulatory phrases |
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| [RhaS,+] phrase |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [RhaS,+,-74] [RhaS,+,-41] | rhaTp | |||
| [RhaS,+,-74] [RhaS,+,-40] | rhaSp2 | |||
| [RhaS,+,-74] [RhaS,+,-40] | rhaSp | |||
| [RhaS,+,-73] [RhaS,+,-40] | rhaBp |
| [RhaS,+] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases. |
| Remote upstream site(s) | Proximal site(s) | Remote downstream site(s) | Promoter name | |
|---|---|---|---|---|
| [RhaS,?,-499.0] [ArcA,-,-184.0,-173.0,-156.0] [CRP,+,-93.5] | [RhaS,+,-41.0,-74.0] | rhaTp | ||
| [CRP,+,-111.5] | [RhaR,+,-40.0,-74.0] [RhaS,+,-40.0,-74.0] [CRP,+,-92.5] | [RhaS,?,915.0] | rhaSp2 | |
| [CRP,+,-111.5] | [RhaR,+,-40.0,-74.0] [RhaS,+,-40.0,-74.0] [CRP,+,-92.5] | [RhaS,?,915.0] | rhaSp | |
| [CRP,+,-122.5] | [RhaS,+,-40.0,-73.0] [CRP,+,-92.5] | rhaBp |
