RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [TyrR,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[TyrR,-] Regulatory phrases      

[TyrR,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [TyrR,-,-38]   aroGp
    [TyrR,-,-64.5] [TyrR,-,-41.5]   tyrPp1
  [TyrR,-,-95.5] [TyrR,-,-51.5]   tyrRp
  [TyrR,-,-104.5] [TyrR,-,-52.5] [TyrR,-,-29.5]   aroFp
    [TyrR,-,19.5] [TyrR,-,42.5] aroPp2
    [TyrR,-,19.5] [TyrR,-,42.5] tyrBp
    [TyrR,-,-45] [TyrR,-,12] [TyrR,-,31] aroLp1
      [TyrR,-,40.5] [TyrR,-,63.5] aroPp1


[TyrR,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [CpxR,+,-38.0] [TyrR,-,-38.0] aroGp
  [TyrR,-,-41.5,-64.5] [TyrR,+,-64.5] tyrPp1
  [TyrR,-,-95.5] [TyrR,-,-51.5] tyrRp
  [TyrR,-,-104.5] [TyrR,-,-29.5,-52.5] [SoxR,+,8.5] aroFp
  [Cra,+,-198.5] [TyrR,-,19.5] [TyrR,-,42.5] aroPp2
  [TyrR,-,19.5] [TyrR,-,42.5] tyrBp
  [TyrR,-,-45.0,12.0] [TyrR,-,31.0] [TrpR,-,48.5,56.5] aroLp1
  [Cra,+,-177.5] [TyrR,-,63.5,40.5] aroPp1

  

  

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