RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [PurR,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[PurR,-] Regulatory phrases      

[PurR,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [PurR,-,-59.5]   glyAp
    [PurR,-,-58.5]   pyrDp
    [PurR,-,-48.5]   prsp
    [PurR,-,-42.5]   glnBp1
    [PurR,-,-38.5]   purLp
    [PurR,-,-37.5]   purEp
    [PurR,-,-36.5]   codBp
    [PurR,-,-28.5]   cvpAp1
    [PurR,-,-27.5]   purMp
    [PurR,-,-24.5]   guaBp
    [PurR,-,-23.5]   pyrCp
    [PurR,-,-21.5]   purTp
    [PurR,-,-20.5]   purHp
    [PurR,-,2.5]   purCp
    [PurR,-,7.5]   gcvTp
    [PurR,-,11.5]   speAp
    [PurR,-,20.5]   glnBp2
    [PurR,-,-90.5] [PurR,-,9.5]   purAp
  [PurR,-,-128.5]     carAp1
      [PurR,-,892.5] hflDp
      [PurR,-,103.5] [PurR,-,191.5] purRp


[PurR,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [MetR,+,-121.0,-143.0] [MetR,-,-143.0] [PurR,-,-59.5] glyAp
  [Fis,-,-4.0] [PurR,-,-58.5] pyrDp
  [PurR,-,-48.5] prsp
  [PurR,-,-42.5] glnBp1
  [PurR,-,-38.5] purLp
  [PurR,-,-37.5] purEp
  [PurR,-,-36.5] [Nac,+,-58.0] codBp
  [PurR,-,-28.5] cvpAp1
  [FNR,-,-192.5] [PurR,-,-27.5] purMp
  [CRP,+,-117.5] [Fis,-,-11.0,8.0,29.0] [PurR,-,-24.5] [DnaA,-,248.0] guaBp
  [PurR,-,-23.5] [Fur,-,-88.5] pyrCp
  [PurR,-,-21.5] purTp
  [PhoP,+,-479.0] [PurR,-,-20.5] [RbsR,-,-20.5] purHp
  [PurR,-,2.5] purCp
  [GcvA,-,-258.0,-226.0] [CRP,+,-145.5,-313.5] [GcvA,+,-226.0,-258.0] [Lrp,+,-161.0] [GcvA,-,-44.0,-66.0] [PurR,-,7.5] gcvTp
  [PurR,-,11.5] speAp
  [PurR,-,20.5] glnBp2
  [MarA,-,-43.0] [PurR,-,-90.5,9.5] purAp
  [PepA,-,-173.0] [PurR,-,-128.5] [IHF,+,-305.0] [Fis,+,-156.0,-103.0] [IHF,-,-305.0] [RutR,+,-184.0] [PepA,-,-79.0] [Fis,+,-81.0] carAp1
  [PurR,-,892.5] hflDp
  [Fur,-,-49.0] [PurR,-,191.5,103.5] purRp

  

  

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