RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [GadX,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[GadX,-] Regulatory phrases      

[GadX,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [GadX,-,-233.5] [GadX,-,-69]   ydeNp
  [GadX,-,-126.5] [GadX,-,-74.5] [GadX,-,-53.5]   hdeAp
  [GadX,-,-126.5] [GadX,-,-74.5] [GadX,-,-53.5]   hdeAp2
  [GadX,-,-96.5] [GadX,-,-68.5] [GadX,-,-53.5] [GadX,-,-32.5]   gadWp2
  [GadX,-,-151]     tppBp
  [GadX,-,-94.5]     ynfBp
      [GadX,-,74.5] [GadX,-,105.5] [GadX,-,134.5] btuBp


[GadX,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [GadX,-,-233.5] [NagC,-,-140.0] [GadX,-,-69.0] [NagC,-,-16.0] ydeNp
  [GadX,+,-126.5] [GadW,-,-126.5] [GadW,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-159.0,-116.0,-97.0] [H-NS,-,-118.0] [GadX,+,-53.5,-74.5] [GadW,-,-53.5,-74.5] [GadW,+,-74.5,-53.5] [GadE,+,9.5] [TorR,+,-27.5,-51.5] [GadX,-,-74.5,-53.5] [MarA,-,-39.0] [Lrp,-,-64.0,-55.0,-18.0] [FliZ,-,8.0] [PhoP,+,-32.0] hdeAp
  [GadX,+,-126.5] [GadW,-,-126.5] [GadW,+,-126.5] [GadE,+,-117.5] [GadX,-,-126.5] [Lrp,-,-97.0,-159.0,-116.0] [H-NS,-,-118.0] [GadX,+,-53.5,-74.5] [GadW,-,-74.5,-53.5] [GadW,+,-74.5,-53.5] [GadE,+,9.5] [TorR,+,-51.5,-27.5] [GadX,-,-74.5,-53.5] [MarA,-,-39.0] [Lrp,-,-18.0,-55.0,-64.0] [FliZ,-,8.0] [PhoP,+,-32.0] hdeAp2
  [GadX,-,-96.5] [GadW,-,-53.5,-32.5] [GadX,-,-32.5,-68.5,-53.5] [PhoP,+,-28.0] gadWp2
  [GadX,-,-151.0] [OmpR,+,-45.5] tppBp
  [GadX,-,-94.5] ynfBp
  [GadX,-,134.5,74.5,105.5] btuBp

  

  

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