RegulonDB RegulonDB 11.2: Regulatory Phrase Regulatory Phrase
   

  

List of promoters regulated by [RstA,-] regulatory phrase

  

List of promoters with sites of this regulated phrase. Proximal sites are those within the interval from -93 to +30 with respect to the TSS (+1); from where the TF can in principle directly interact with RNA polymerase. All other sites are considered remote, either upstream or downstream.

Promoters and their regulatory phrases

  


[RstA,-] Regulatory phrases      

[RstA,-] phrase
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
    [RstA,-,-92]   ompFp
    [RstA,-,-92]   ompFp2
    [RstA,-,-59.5]   csgDp
    [RstA,-,-59.5]   csgDp2
    [RstA,-,-50.5]   csgDp3
    [RstA,-,-50.5]   csgDp1


[RstA,-] phrase and all other phrases that regulate this promoter(s). List of promoters and their corresponding regulatory phrases.
  Remote upstream site(s) Proximal site(s) Remote downstream site(s) Promoter name
  [OmpR,-,-370.5] [CRP,+,-121.5] [IHF,+,-108.0] [IHF,-,-176.0] [CpxR,-,-93.0,-429.5,-373.0] [OmpR,+,-90.5,-70.5,-50.5] [OmpR,-,-50.5,-70.5] [CRP,+,-52.5,-92.5] [IHF,-,-62.0] [CpxR,-,-68.5] [RstA,-,-92.0] ompFp
  [OmpR,-,-370.5] [CRP,+,-121.5] [IHF,+,-108.0] [IHF,-,-176.0] [CpxR,-,-93.0,-373.0,-429.5] [OmpR,+,-90.5,-50.5,-70.5] [OmpR,-,-50.5,-70.5] [CRP,+,-92.5,-52.5] [IHF,-,-62.0] [CpxR,-,-68.5] [RstA,-,-92.0] ompFp2
  [RstA,-,-59.5] csgDp
  [RstA,-,-59.5] csgDp2
  [CsgD,+,-118.5,-166.5] [CRP,+,-170.5] [RcdA,+,-298.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-178.0,-186.0,-141.0,-108.5,-166.0,-95.5,-100.0,-129.5] [Cra,+,-196.5,-227.5,-563.5] [CsgD,+,29.5] [BtsR,-,-25.0] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,-21.5,-43.0,-48.0,-73.5,-52.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp3
  [CsgD,+,-166.5,-118.5] [CRP,+,-170.5] [RcdA,+,-298.5] [IHF,+,-173.5] [MlrA,+,-129.5] [CpxR,-,-166.0,-178.0,-186.0,-129.5,-100.0,-108.5,-95.5,-141.0] [Cra,+,-563.5,-196.5,-227.5] [CsgD,+,29.5] [BtsR,-,-25.0] [BasR,+,-90.5] [OmpR,+,-49.5] [CRP,+,-42.5] [IHF,+,-66.5] [CpxR,-,-48.0,-73.5,-21.5,-52.0,-43.0] [RstA,-,-50.5] [MqsA,-,-83.5] [BtsR,-,37.0] [Cra,+,46.5] csgDp1

  

  

RegulonDB