Downloadable Experimental Datasets

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Datasets supported by literature with experimental evidence:
 

Description	File
E. coli K-12 genome sequence used into RegulonDB	E. coli K-12 genome sequence raw format	Download
	E. coli K-12 genebank	Download
	E. coli K-12 genebank refseq	Download
Sequences	Gene Sequence Download 5' and 3' UTR sequence of TUs Download
Gene - Product	All gene products Download Gene Product Identifiers Download sRNA genes Download
Transcriptional Factors - Functional conformation	Download
Regulatory Interactions	Complete RIs Set Download Browser and Filter RIs by confidence level Confirmed RIs Download Strong RIs Download Weak RIs Download RIs excluding specific HT-binding evidence type RIs set without ChIP-seq evidence Download
Regulatory Network Interactions	TF - gene interactions Download TF - operon interactions Download TF - TU interactions Download TF - TF interactions Download Sigma - gene interactions Download Sigma - TU interactions Download Alon and MA interactions Download sRNA - gene interactions Download
Promoters	All Promoters Download Sigma 70 Download Sigma 54 Download Sigma 38 Download Sigma 32 Download Sigma 28 Download Sigma 24 Download Sigma 19 Download Unknown Download
Transcription start sites experimentally determined in the laboratory of Dr. Morett	High-throughput transcription initiation mapping. Illumina directional RNA-seq experiments were total RNA received different treatments to enrich for 5' monophosphate or 5' triphosphate ends. Version 3.0. See the file description. Download High-throughput transcription initiation mapping. See the file description. Download 5'-RACE transcription initiation mapping with specific primers. See the file description. Download
Transcription Factor Weight Matrix	TF-Matrix browser Download
Active and Inactive Transcription Factor Conformations	Download
Transcription Units	Download
Operons	Download
Growth Conditions	Download
RBSs	Download
Terminators	Download